Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_D17
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60 pr... 201 2e-51
U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein. 201 2e-51
BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a, sub... 201 2e-51
BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a, sub... 201 2e-51
AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a, sub... 201 2e-51
AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a, sub... 201 2e-51
BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein. 36 0.19
BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein. 36 0.19
AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens ... 36 0.19
AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein. 36 0.19
AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein. 36 0.19
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 34 0.77
AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein. 33 1.0
AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein. 33 1.0
AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein. 33 1.0
>X81789-1|CAA57388.1| 501|Homo sapiens splicing factor SF3a60
protein.
Length = 501
Score = 201 bits (491), Expect = 2e-51
Identities = 101/174 (58%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = +2
Query: 323 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 502
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 503 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENP 682
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP 120
Query: 683 AEDSQFLSSH**RRLW-KVXXLHSCYEKYLT*KVLRK-XIIFILEHIDHLLTXP 838
+E++Q L + + LH CY KY+ K K I L D L P
Sbjct: 121 SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>U08815-1|AAA19625.1| 501|Homo sapiens SAP 61 protein.
Length = 501
Score = 201 bits (491), Expect = 2e-51
Identities = 101/174 (58%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = +2
Query: 323 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 502
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 503 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENP 682
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP 120
Query: 683 AEDSQFLSSH**RRLW-KVXXLHSCYEKYLT*KVLRK-XIIFILEHIDHLLTXP 838
+E++Q L + + LH CY KY+ K K I L D L P
Sbjct: 121 SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>BC011523-1|AAH11523.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 201 bits (491), Expect = 2e-51
Identities = 101/174 (58%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = +2
Query: 323 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 502
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 503 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENP 682
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP 120
Query: 683 AEDSQFLSSH**RRLW-KVXXLHSCYEKYLT*KVLRK-XIIFILEHIDHLLTXP 838
+E++Q L + + LH CY KY+ K K I L D L P
Sbjct: 121 SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>BC002395-1|AAH02395.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 201 bits (491), Expect = 2e-51
Identities = 101/174 (58%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = +2
Query: 323 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 502
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 503 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENP 682
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP 120
Query: 683 AEDSQFLSSH**RRLW-KVXXLHSCYEKYLT*KVLRK-XIIFILEHIDHLLTXP 838
+E++Q L + + LH CY KY+ K K I L D L P
Sbjct: 121 SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>AL603790-5|CAH69930.1| 501|Homo sapiens splicing factor 3a,
subunit 3, 60kDa protein.
Length = 501
Score = 201 bits (491), Expect = 2e-51
Identities = 101/174 (58%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = +2
Query: 323 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 502
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 503 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENP 682
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP 120
Query: 683 AEDSQFLSSH**RRLW-KVXXLHSCYEKYLT*KVLRK-XIIFILEHIDHLLTXP 838
+E++Q L + + LH CY KY+ K K I L D L P
Sbjct: 121 SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>AK222554-1|BAD96274.1| 501|Homo sapiens splicing factor 3a,
subunit 3 variant protein.
Length = 501
Score = 201 bits (491), Expect = 2e-51
Identities = 101/174 (58%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Frame = +2
Query: 323 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 502
METILEQQR YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++L
Sbjct: 1 METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDL 60
Query: 503 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENP 682
Y+DKDGLRKEE++A+SGP+EF EFY+RLKQIKEFHRKHPNEI VPMSVEFEEL RENP
Sbjct: 61 YDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENP 120
Query: 683 AEDSQFLSSH**RRLW-KVXXLHSCYEKYLT*KVLRK-XIIFILEHIDHLLTXP 838
+E++Q L + + LH CY KY+ K K I L D L P
Sbjct: 121 SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIP 174
>BC130564-1|AAI30565.1| 905|Homo sapiens KIAA1524 protein.
Length = 905
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +2
Query: 320 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 499
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 758 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 817
Query: 500 LYEDKDGLRKEEISAL 547
L ++++ ++E I L
Sbjct: 818 LQKERED-KEETIDIL 832
>BC017659-1|AAH17659.1| 285|Homo sapiens KIAA1524 protein protein.
Length = 285
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +2
Query: 320 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 499
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 138 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 197
Query: 500 LYEDKDGLRKEEISAL 547
L ++++ ++E I L
Sbjct: 198 LQKERED-KEETIDIL 212
>AK022912-1|BAB14305.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ12850 fis, clone NT2RP2003394, weakly similar to
INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1. ).
Length = 472
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +2
Query: 320 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 499
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 325 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 384
Query: 500 LYEDKDGLRKEEISAL 547
L ++++ ++E I L
Sbjct: 385 LQKERED-KEETIDIL 399
>AF334474-1|AAL11632.1| 905|Homo sapiens p90 autoantigen protein.
Length = 905
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +2
Query: 320 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 499
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 758 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 817
Query: 500 LYEDKDGLRKEEISAL 547
L ++++ ++E I L
Sbjct: 818 LQKERED-KEETIDIL 832
>AB040957-1|BAA96048.1| 884|Homo sapiens KIAA1524 protein protein.
Length = 884
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/76 (21%), Positives = 43/76 (56%)
Frame = +2
Query: 320 KMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKE 499
++ET+ + S E+ E+++ ++++ +K + ++ +H+L NLH + ++K
Sbjct: 737 QIETVKKLNESLKEQNEKSIAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQEEKIKT 796
Query: 500 LYEDKDGLRKEEISAL 547
L ++++ ++E I L
Sbjct: 797 LQKERED-KEETIDIL 811
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 33.9 bits (74), Expect = 0.77
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +2
Query: 338 EQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYI---EASIRLKE--- 499
E+Q +ER+R +E+LH++ G R+ + + RL+ +R E +RL+E
Sbjct: 1307 EEQPLLRQERDRKFRE--EELLHQEQG-RKFLEEEQRLREERERKFLKEEQQLRLEEREQ 1363
Query: 500 LYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRK 613
L +D+D +EE LS ++F +Q++ R+
Sbjct: 1364 LRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERE 1401
>AL365436-3|CAI16590.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 33.5 bits (73), Expect = 1.0
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Frame = +2
Query: 317 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 496
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1050 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1108
Query: 497 EL----------YEDKDGLRKEEISALSGPHEFQE-FYSRLKQIKEFHRKHPNEISVPMS 643
L E DGLRK+ + HE E +R+K +++ + + + +
Sbjct: 1109 ALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESA 1168
Query: 644 VEFEELANQRE 676
++ E L++ E
Sbjct: 1169 LKNEGLSSDEE 1179
>AF263462-1|AAF74498.1| 1203|Homo sapiens cingulin protein.
Length = 1203
Score = 33.5 bits (73), Expect = 1.0
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Frame = +2
Query: 317 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 496
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1050 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1108
Query: 497 EL----------YEDKDGLRKEEISALSGPHEFQE-FYSRLKQIKEFHRKHPNEISVPMS 643
L E DGLRK+ + HE E +R+K +++ + + + +
Sbjct: 1109 ALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESA 1168
Query: 644 VEFEELANQRE 676
++ E L++ E
Sbjct: 1169 LKNEGLSSDEE 1179
>AB037740-1|BAA92557.1| 1208|Homo sapiens KIAA1319 protein protein.
Length = 1208
Score = 33.5 bits (73), Expect = 1.0
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Frame = +2
Query: 317 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLK 496
L+ + L Q+R EERE+T+ L +K +I + ++++D+ + S+R+K
Sbjct: 1055 LESQNQLLQERLQAEEREKTVLQSTNRKLERKV-KELSIQIEDERQHVNDQKDQLSLRVK 1113
Query: 497 EL----------YEDKDGLRKEEISALSGPHEFQE-FYSRLKQIKEFHRKHPNEISVPMS 643
L E DGLRK+ + HE E +R+K +++ + + + +
Sbjct: 1114 ALKRQVDEAEEEIERLDGLRKKAQREVEEQHEVNEQLQARIKSLEKDSWRKASRSAAESA 1173
Query: 644 VEFEELANQRE 676
++ E L++ E
Sbjct: 1174 LKNEGLSSDEE 1184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,263,831
Number of Sequences: 237096
Number of extensions: 1801837
Number of successful extensions: 4087
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4075
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -