Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_D17
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 124 1e-28
Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 31 1.1
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 31 1.1
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 31 1.1
AC006713-4|AAK68404.1| 321|Caenorhabditis elegans Hypothetical ... 31 1.4
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 29 4.3
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 5.7
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 124 bits (298), Expect = 1e-28
Identities = 58/157 (36%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Frame = +2
Query: 323 METILEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 502
M++ LE R+ HEERER +D VKE + +K H+ +N++ R+K DRY S L +
Sbjct: 1 MDSCLETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKF 60
Query: 503 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRENP 682
Y+D+DG + E+ ++SGP+EF EFYSRLK IK+ HR++P+E++ P++VEF+++ + NP
Sbjct: 61 YKDEDGSKSMEMDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINP 120
Query: 683 AE-DSQFLSSH**RRLWKVXXLHSCYEKYLT*KVLRK 790
+ + + LH+ Y+K++ K +++
Sbjct: 121 ERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKR 157
>Z48006-3|CAB62803.1| 449|Caenorhabditis elegans Hypothetical
protein F19C6.2b protein.
Length = 449
Score = 31.5 bits (68), Expect = 0.81
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +2
Query: 362 ERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEIS 541
ER + ++E + KT R+ + RL N HDR + + + D D ++
Sbjct: 146 ERPDILSLAIREFV--KTDERKIKELEKRLANEHDR-----VMIHTIINDTDWKEVTAVA 198
Query: 542 ALSGPHEF--QEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRE 676
+ P + L E H PN + VP+S F+++ ++ E
Sbjct: 199 DIESPTDIVSHRVSLALLAFDEKHSSIPNGVDVPVSGLFQKVGDRFE 245
>Z48006-2|CAA88050.1| 495|Caenorhabditis elegans Hypothetical
protein F19C6.2a protein.
Length = 495
Score = 31.5 bits (68), Expect = 0.81
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +2
Query: 362 ERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEIS 541
ER + ++E + KT R+ + RL N HDR + + + D D ++
Sbjct: 192 ERPDILSLAIREFV--KTDERKIKELEKRLANEHDR-----VMIHTIINDTDWKEVTAVA 244
Query: 542 ALSGPHEF--QEFYSRLKQIKEFHRKHPNEISVPMSVEFEELANQRE 676
+ P + L E H PN + VP+S F+++ ++ E
Sbjct: 245 DIESPTDIVSHRVSLALLAFDEKHSSIPNGVDVPVSGLFQKVGDRFE 291
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = +2
Query: 341 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 520
Q + ++ E+T+ + EI +K H E + ++R+K R S L E + D
Sbjct: 195 QSQENLDDLEKTVQNLKVEI--EKLKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDM 251
Query: 521 LRKEEISALSGPHEFQEFYSRLK----QIKEFHRKHPNEISVPMSVEFEELANQRENPAE 688
LRK+ I A H Q++ +L+ +++ R+ +++ + + E E E
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQTSTAELERRLRESEHDVERLRTSQLEMATKFEEASRE 311
Query: 689 DSQFLS 706
++ LS
Sbjct: 312 NTDLLS 317
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 31.1 bits (67), Expect = 1.1
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Frame = +2
Query: 341 QQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 520
Q + ++ E+T+ + EI +K H E + ++R+K R S L E + D
Sbjct: 195 QSQENLDDLEKTVQNLKVEI--EKLKH-ERFDFENRMKIAEKRVESLSSNLSESKQQGDM 251
Query: 521 LRKEEISALSGPHEFQEFYSRLK----QIKEFHRKHPNEISVPMSVEFEELANQRENPAE 688
LRK+ I A H Q++ +L+ +++ R+ +++ + + E E E
Sbjct: 252 LRKQLIQAKDDKHIIQQYEVKLQTSTAELERRLRESEHDVERLRTSQLEMATKFEEASRE 311
Query: 689 DSQFLS 706
++ LS
Sbjct: 312 NTDLLS 317
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 317 LKMETILEQQRSYHEERERTMDAMVKEILHKKTGHRE--TINADHRLKNLHDRYIEASIR 490
+K ET+ E +SYH+ + R + K+++ +K RE T+N R KN + +I
Sbjct: 340 VKDETLSEAMQSYHDLKMR-FKSKTKDVVKQKDAQREGQTMNMLERFKNRLGASNQKAIL 398
Query: 491 LKELYEDKDGLRKEE 535
+ E K+ + + E
Sbjct: 399 FDKKIEIKEPILRNE 413
>AC006713-4|AAK68404.1| 321|Caenorhabditis elegans Hypothetical
protein Y119D3A.1 protein.
Length = 321
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 437 ADHRLKNLHDRYIEASIRL-KELYEDKDGLRKEEISALSGPHEFQEFYSR 583
A + L+ +E S +L LYED + EE++ SG EF++FY +
Sbjct: 109 AKNNATELYFSSLEKSNKLGASLYEDSENAGAEEMNISSGTIEFKDFYHK 158
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.3
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Frame = +2
Query: 320 KMETILEQQRS--YHEERERTMDAM--VKEILHKKTGHRETIN----ADHRLKNLHDRYI 475
K++T LEQ++ Y E+ +A VK ++ ++ + + +N A+ L + ++Y
Sbjct: 657 KVKTELEQEKGIDYQSILEKIKEAREEVKNVI--RSDYTDCLNKVRKAEDTLAKIENKYK 714
Query: 476 EASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFHRKHPNEISVPMSVEFE 655
+ S +K+ ++KD + K + EFQ+ ++ E +K E+ +F+
Sbjct: 715 KESEEVKKTGKNKDKVEKTKEEVEKAKEEFQKVKEEFQKEVEKVKKVEKELEKAKESDFK 774
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 335 LEQQRSYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 514
+E R E+ E+ A K +L K + N + RL L D Y + ++ K L E+K
Sbjct: 948 METVRDLEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDAY-DKLLKEKRLLEEK 1006
Query: 515 -DGL 523
+GL
Sbjct: 1007 VEGL 1010
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 28.3 bits (60), Expect = 7.6
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 353 YHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRL---KELYEDKDGL 523
YH+ RE+++ A+ +++ H+E + R++ D ++ I L KE E K
Sbjct: 48 YHDSREKSLVALTEKL------HQEFMEDQERVR--RDLLVQFKIELDQTKEELEKKHAE 99
Query: 524 R-KEEISALSGPHEFQEFYSRLKQ 592
KEEI LS H+ + ++ KQ
Sbjct: 100 NLKEEIEKLSEKHQRELAVAKKKQ 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,665,313
Number of Sequences: 27780
Number of extensions: 325440
Number of successful extensions: 940
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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