Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_D14
(908 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003526-1|AAO39530.1| 190|Drosophila melanogaster RE19605p pro... 225 5e-59
BT001575-1|AAN71330.1| 190|Drosophila melanogaster RE23139p pro... 225 5e-59
AY051983-1|AAK93407.1| 190|Drosophila melanogaster LD45324p pro... 225 5e-59
AE014297-2444|AAO41575.1| 190|Drosophila melanogaster CG7217-PB... 225 5e-59
AE014297-2443|AAF55497.2| 190|Drosophila melanogaster CG7217-PA... 225 5e-59
BT022231-1|AAY54647.1| 133|Drosophila melanogaster IP12465p pro... 40 0.006
AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch dep... 30 5.0
AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA p... 30 5.0
>BT003526-1|AAO39530.1| 190|Drosophila melanogaster RE19605p
protein.
Length = 190
Score = 225 bits (551), Expect = 5e-59
Identities = 104/153 (67%), Positives = 124/153 (81%), Gaps = 1/153 (0%)
Frame = +1
Query: 133 GSCCHAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKS- 309
G + DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPGYV +AD+LKS
Sbjct: 38 GDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPGYVSSADELKSK 97
Query: 310 DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKR 489
GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +LPPLGG RSKR
Sbjct: 98 QGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKR 157
Query: 490 FSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 588
+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 158 YSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>BT001575-1|AAN71330.1| 190|Drosophila melanogaster RE23139p
protein.
Length = 190
Score = 225 bits (551), Expect = 5e-59
Identities = 104/153 (67%), Positives = 124/153 (81%), Gaps = 1/153 (0%)
Frame = +1
Query: 133 GSCCHAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKS- 309
G + DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPGYV +AD+LKS
Sbjct: 38 GDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPGYVSSADELKSK 97
Query: 310 DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKR 489
GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +LPPLGG RSKR
Sbjct: 98 QGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKR 157
Query: 490 FSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 588
+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 158 YSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AY051983-1|AAK93407.1| 190|Drosophila melanogaster LD45324p
protein.
Length = 190
Score = 225 bits (551), Expect = 5e-59
Identities = 104/153 (67%), Positives = 124/153 (81%), Gaps = 1/153 (0%)
Frame = +1
Query: 133 GSCCHAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKS- 309
G + DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPGYV +AD+LKS
Sbjct: 38 GDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPGYVSSADELKSK 97
Query: 310 DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKR 489
GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +LPPLGG RSKR
Sbjct: 98 QGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKR 157
Query: 490 FSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 588
+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 158 YSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AE014297-2444|AAO41575.1| 190|Drosophila melanogaster CG7217-PB,
isoform B protein.
Length = 190
Score = 225 bits (551), Expect = 5e-59
Identities = 104/153 (67%), Positives = 124/153 (81%), Gaps = 1/153 (0%)
Frame = +1
Query: 133 GSCCHAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKS- 309
G + DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPGYV +AD+LKS
Sbjct: 38 GDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPGYVSSADELKSK 97
Query: 310 DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKR 489
GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +LPPLGG RSKR
Sbjct: 98 QGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKR 157
Query: 490 FSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 588
+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 158 YSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>AE014297-2443|AAF55497.2| 190|Drosophila melanogaster CG7217-PA,
isoform A protein.
Length = 190
Score = 225 bits (551), Expect = 5e-59
Identities = 104/153 (67%), Positives = 124/153 (81%), Gaps = 1/153 (0%)
Frame = +1
Query: 133 GSCCHAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKS- 309
G + DLFEDSPANK+N +L GKKV++F VPGAFTPGCSKTHLPGYV +AD+LKS
Sbjct: 38 GDSLPSVDLFEDSPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPGYVSSADELKSK 97
Query: 310 DGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKALDLGTNLPPLGGFRSKR 489
GV EIVCVSVNDP+VM+AWG +H GKVR+LADP+G F KALD+ +LPPLGG RSKR
Sbjct: 98 QGVDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTIDLPPLGGVRSKR 157
Query: 490 FSMVIVDSKVQDLNVEPDGTGLSCSLADKIKVK 588
+S+V+ + KV +LNVEPDGTGLSCSLA+ I K
Sbjct: 158 YSLVVENGKVTELNVEPDGTGLSCSLANNIGKK 190
>BT022231-1|AAY54647.1| 133|Drosophila melanogaster IP12465p
protein.
Length = 133
Score = 39.5 bits (88), Expect = 0.006
Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -1
Query: 380 C*APQAAITYGSLTDTHTISATPS-DFSLSAFCT 282
C PQA IT GSLT+T TIS+TP DFS SA T
Sbjct: 100 CSLPQADITKGSLTETQTISSTPCLDFSSSAELT 133
>AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch
depedent uracil/thymineDNA glycosylase protein.
Length = 1738
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 486 FGAETSERRQ-IGAQVQSLDEVAAGIG*HTHLSFSVVLSSPSRHHI-RVINRHAH 328
FGA SE Q + Q Q L + + H HL S +S ++HH+ + I++H H
Sbjct: 447 FGAHQSEHHQRLNQQQQPLQHL---LDCHGHLEQSTPISQQNQHHLSQQIHQHQH 498
>AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA
protein.
Length = 1738
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 486 FGAETSERRQ-IGAQVQSLDEVAAGIG*HTHLSFSVVLSSPSRHHI-RVINRHAH 328
FGA SE Q + Q Q L + + H HL S +S ++HH+ + I++H H
Sbjct: 447 FGAHQSEHHQRLNQQQQPLQHL---LDCHGHLEQSTPISQQNQHHLSQQIHQHQH 498
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,867,777
Number of Sequences: 53049
Number of extensions: 910559
Number of successful extensions: 2161
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2156
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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