Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D13
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    27   0.26 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   7.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +1

Query: 424 RPDDKHELRHAPEAPGHIQGPVPARKP-RACHVRHIRLQHATNKD 555
           +P   H    APE P H +G + A KP   C+ R +  Q  T  +
Sbjct: 8   KPPLGHLRFKAPELPEHWEGVLDATKPGNVCYQRDLFRQKITGSE 52


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
 Frame = +2

Query: 281 PLPEDKVLATYVWIDGSGEHVRC-KDRTLNYIPETPKDLPIWNY 409
           PL + K LAT V     G  ++C K R    I  T      W Y
Sbjct: 235 PLAQTKKLATIVGCGTDGTMIKCLKSRPARQIALTVPRYQAWWY 278


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
 Frame = +2

Query: 281 PLPEDKVLATYVWIDGSGEHVRC-KDRTLNYIPETPKDLPIWNY 409
           PL + K LAT V     G  ++C K R    I  T      W Y
Sbjct: 235 PLAQTKKLATIVGCGTDGTMIKCLKSRPARQIALTVPRYQAWWY 278


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 156 LEKCRKLKTKCKTIQKFYRV 215
           L+K  K++T C+ +   YR+
Sbjct: 193 LQKYLKIETSCRYVGTLYRI 212


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = -3

Query: 552 FVGCML*SYVSHMTSTWFPRRNGSLYMAWGFRCVSEFV 439
           ++  ++ +Y+     TW       LY  W    +SEF+
Sbjct: 121 WIWLLIFAYLIPEVGTWIRAVRKCLYKLWKMPSLSEFL 158


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = -3

Query: 552 FVGCML*SYVSHMTSTWFPRRNGSLYMAWGFRCVSEFV 439
           ++  ++ +Y+     TW       LY  W    +SEF+
Sbjct: 121 WIWLLIFAYLIPEVGTWIRAVRKCLYKLWKMPSLSEFL 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,943
Number of Sequences: 336
Number of extensions: 3730
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)