Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_D12
(878 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 327 1e-90
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 318 7e-88
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 269 4e-73
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 262 3e-71
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 254 9e-69
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 198 6e-52
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 190 3e-49
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 177 2e-45
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 173 3e-44
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 125 1e-29
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 30 0.38
SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces po... 27 3.5
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 27 3.5
SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.5
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 27 4.7
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 6.1
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 26 8.1
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 26 8.1
SPBC29B5.03c |rpl26||60S ribosomal protein L26|Schizosaccharomyc... 26 8.1
SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subuni... 26 8.1
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 327 bits (804), Expect = 1e-90
Identities = 143/194 (73%), Positives = 170/194 (87%)
Frame = +1
Query: 238 MEDKASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHG 417
M + E+D+WI+QL+ C+ L+E V +CD AKE+L+ ESNVQ V+CPVTVCGD+HG
Sbjct: 1 MSVSGKIGEVDRWIEQLSRCEPLSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHG 60
Query: 418 QFHDLMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 597
QFHDLMELF IGG SPDTNYLFMGDYVDRGY+SVETV+LL+A K+RY +RITILRGNHES
Sbjct: 61 QFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHES 120
Query: 598 RQITQVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHI 777
RQITQVYGFYDECLRKYGNA+VW++FTDLFD+LPLTAL++ +IFCLHGGLS SIDTLDH+
Sbjct: 121 RQITQVYGFYDECLRKYGNANVWQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHV 180
Query: 778 RALDRLQEVPPKDP 819
R LDR+QEVP + P
Sbjct: 181 RILDRVQEVPHEGP 194
Score = 53.6 bits (123), Expect = 4e-08
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3
Query: 810 EGPMCDLLWSDPDDRXGWGIFPR 878
EGP+CDLLWSDPDDR GWGI PR
Sbjct: 192 EGPICDLLWSDPDDRPGWGISPR 214
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 318 bits (781), Expect = 7e-88
Identities = 139/190 (73%), Positives = 170/190 (89%)
Frame = +1
Query: 250 ASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHD 429
A+L ++D+WI+QL +C+ L+E V+ LCDKA+E+L +E+NVQ V+ PVTVCGD+HGQFHD
Sbjct: 18 ATLGDVDRWIEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHD 77
Query: 430 LMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQIT 609
LMELF+IGG PD NYLFMGDYVDRGY+SVETV+LLVA+K+RY RITILRGNHESRQIT
Sbjct: 78 LMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQIT 137
Query: 610 QVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHIRALD 789
QVYGFYDECLRKYG+A+VWKHFT+LFD+ PLTAL++ +IFCLHGGLS SID+LDH+R LD
Sbjct: 138 QVYGFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLD 197
Query: 790 RLQEVPPKDP 819
R+QEVP + P
Sbjct: 198 RVQEVPHEGP 207
Score = 55.2 bits (127), Expect = 1e-08
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +3
Query: 810 EGPMCDLLWSDPDDRXGWGIFPR 878
EGPMCDLLWSDPDDR GWGI PR
Sbjct: 205 EGPMCDLLWSDPDDRCGWGISPR 227
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 269 bits (659), Expect = 4e-73
Identities = 115/182 (63%), Positives = 146/182 (80%)
Frame = +1
Query: 262 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 441
+LD+WI + +CK L E+Q+K LC+ K IL +ESN+Q V+ PVTVCGD+HGQF+DL+EL
Sbjct: 3 DLDEWIATVRKCKYLPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLEL 62
Query: 442 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 621
FR+GG P TNY+FMGD+VDRGY+S+ET TL + LK RY ++IT+LRGNHESRQITQVYG
Sbjct: 63 FRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYG 122
Query: 622 FYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHIRALDRLQE 801
FYDEC KYGNA+VWK+ +FDFL L A++D +I C+HGGLS + TLD IR L R QE
Sbjct: 123 FYDECQTKYGNANVWKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQE 182
Query: 802 VP 807
+P
Sbjct: 183 IP 184
Score = 38.3 bits (85), Expect = 0.001
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 810 EGPMCDLLWSDPDDRXGWGIFPR 878
EG CDL+WSDP+D W + PR
Sbjct: 186 EGSFCDLMWSDPEDIESWTVSPR 208
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 262 bits (643), Expect = 3e-71
Identities = 117/188 (62%), Positives = 147/188 (78%)
Frame = +1
Query: 262 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 441
+LD I++L E + + E+ + LC AKE+L +ESNV + P+TV GD+HGQF DL+E+
Sbjct: 3 DLDNIIERLYEKQLIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEI 62
Query: 442 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 621
FRIGG P TNYLF+GDYVDRGYYS+ET+TLL+ LK+RY +RIT+LRGNHESR ITQ YG
Sbjct: 63 FRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYG 122
Query: 622 FYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHIRALDRLQE 801
FY ECLRKYGNA+VWK+FTD+FDFL L+A +D IFC+HGGLS SI +D I LDR +E
Sbjct: 123 FYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQILVLDRFRE 182
Query: 802 VPPKDPCA 825
P + P A
Sbjct: 183 FPHEGPMA 190
Score = 31.5 bits (68), Expect = 0.16
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 810 EGPMCDLLWSDPD 848
EGPM DL+WSDPD
Sbjct: 186 EGPMADLVWSDPD 198
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 254 bits (623), Expect = 9e-69
Identities = 108/182 (59%), Positives = 146/182 (80%)
Frame = +1
Query: 262 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 441
+LD +++L + + E+ V LC + ++IL +ESN+Q + PVT+CGD+HGQ HDL+EL
Sbjct: 5 DLDWQLEELENGRLIPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLEL 64
Query: 442 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 621
FRIGG P T YLF+GD+VDRG+YSVET LL+ LK +Y + +T++RGNHESRQITQVYG
Sbjct: 65 FRIGGSCPGTKYLFLGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYG 124
Query: 622 FYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHIRALDRLQE 801
FYDEC+RKYG+A+VW++ ++FD+L L ALVDG++FC+HGGLS SI ++D IR LDR QE
Sbjct: 125 FYDECVRKYGSANVWRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQE 184
Query: 802 VP 807
VP
Sbjct: 185 VP 186
Score = 46.4 bits (105), Expect = 5e-06
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 810 EGPMCDLLWSDPDDRXGWGIFPR 878
EG MCDLLWSDP+D GWG+ PR
Sbjct: 188 EGAMCDLLWSDPEDISGWGLSPR 210
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 198 bits (484), Expect = 6e-52
Identities = 83/169 (49%), Positives = 124/169 (73%)
Frame = +1
Query: 301 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 480
QL+E++++ LC+KA+EI + + E++ P+ +CGD+HGQ++DL+ LF GG P+ NYL
Sbjct: 28 QLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPEANYL 87
Query: 481 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 660
F+GDYVDRG S+E + LL+A K++Y E ILRGNHE I ++YGFYDEC R+Y N
Sbjct: 88 FLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NIK 146
Query: 661 VWKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHIRALDRLQEVP 807
+WK FTD F+ LP+ A++D +IF +HGGLS ++++D I+ + R +VP
Sbjct: 147 LWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQIQRIMRPTDVP 195
Score = 35.1 bits (77), Expect = 0.013
Identities = 14/19 (73%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = +3
Query: 813 GPMCDLLWSDPD-DRXGWG 866
G +CDLLWSDPD D GWG
Sbjct: 198 GLLCDLLWSDPDKDLTGWG 216
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 190 bits (462), Expect = 3e-49
Identities = 78/169 (46%), Positives = 119/169 (70%)
Frame = +1
Query: 301 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 480
QL++ +++ LC ++ I + + E++ P+ +CGD+HGQ+ DL+ LF GG PD NYL
Sbjct: 25 QLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANYL 84
Query: 481 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 660
F+GDYVDRG S+E + LL A K++Y E +LRGNHE I ++YGFYDEC R+Y +
Sbjct: 85 FLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRY-SIK 143
Query: 661 VWKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHIRALDRLQEVP 807
+WK FTD F+ +P+ A++D +IFC+HGGLS +++LD I+ + R ++P
Sbjct: 144 LWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIRPTDIP 192
Score = 32.3 bits (70), Expect = 0.094
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = +3
Query: 813 GPMCDLLWSDPD-DRXGWG 866
G +CDL+WSDP+ D GWG
Sbjct: 195 GLLCDLVWSDPEKDLTGWG 213
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 177 bits (431), Expect = 2e-45
Identities = 80/168 (47%), Positives = 112/168 (66%)
Frame = +1
Query: 304 LTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYLF 483
L ++ ++C +EI + + E+ PV + GDVHGQ+ DL+ LF + G P +NYLF
Sbjct: 214 LKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDVHGQYSDLIRLFEMCGFPPSSNYLF 273
Query: 484 MGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNASV 663
+GDYVDRG S+ET+ LL K+RY E +LRGNHE IT+VYGFYDEC R+ N +
Sbjct: 274 LGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNHECANITRVYGFYDECKRRC-NIKI 332
Query: 664 WKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHIRALDRLQEVP 807
WK F + F+ LP+ ++V G+IFC+HGGLS S+ +D IR + R +VP
Sbjct: 333 WKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDDIREIPRPTDVP 380
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 173 bits (421), Expect = 3e-44
Identities = 81/169 (47%), Positives = 112/169 (66%)
Frame = +1
Query: 301 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 480
+L+E Q + KA EIL E N+ EV PVTVCGD+HGQ++DLM+LF +GG +T YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 481 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 660
F+GDYVDRGY+S+E + L ALK+ Y + + +LRGNHE +T + F EC KY N
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKY-NIK 202
Query: 661 VWKHFTDLFDFLPLTALVDGQIFCLHGGLSXSIDTLDHIRALDRLQEVP 807
V++ F+ LPL A+++ Q C+HGGLS + TL+ IR ++R E P
Sbjct: 203 VYEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPP 251
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 813 GPMCDLLWSDPDDRXG 860
G MCDLLWSDP + G
Sbjct: 254 GLMCDLLWSDPLEDFG 269
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 125 bits (301), Expect = 1e-29
Identities = 68/199 (34%), Positives = 110/199 (55%), Gaps = 6/199 (3%)
Frame = +1
Query: 232 IIMEDKASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCP----VTV 399
+I+E + + + ++ ++ + K+L ++ KE+L K ++ ++ + +
Sbjct: 155 VILEKQITKEFVEDMKERFCQGKKLPLKFAYSILRDLKELLEKTPSLIDIPVKGDETLVI 214
Query: 400 CGDVHGQFHDLMELFRIGGR-SPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITI 576
CGD HGQ+ DL+ +F++ G SP YLF GD+VDRG +S E L A K+ Y + + I
Sbjct: 215 CGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTEVAFTLYAYKLLYPDAVFI 274
Query: 577 LRGNHESRQITQVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGGL-SX 753
RGNHE+ + +VYGF EC KY N + F++ F LPL +L+ +HGGL S
Sbjct: 275 NRGNHETDDMNKVYGFEGECRSKY-NERTFNIFSETFSLLPLGSLISDSYLVVHGGLFSD 333
Query: 754 SIDTLDHIRALDRLQEVPP 810
TLD +R +DR + P
Sbjct: 334 DNVTLDQLRNIDRFSKKQP 352
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 30.3 bits (65), Expect = 0.38
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 235 IMEDKASL-KELDQWIQQLNECKQLTENQVKTLCDKAKEI--LTKESNVQEVKCPVTVCG 405
+ ED SL KEL I + N +Q E K KE+ L K++ +K VC
Sbjct: 1296 VAEDTKSLGKELQNKINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCA 1355
Query: 406 DVHGQFHDLM 435
+ G HDL+
Sbjct: 1356 TLSGSGHDLV 1365
>SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 106 LQNGVCVTSIF*RRRALVQHLNLKEFPIV 20
L +G+C+ S+ A +HL +K +P++
Sbjct: 7 LASGICLVSLLSSTNAAPRHLYVKRYPVI 35
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 250 ASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQ 375
ASL+ +D W Q +NE + +Q + +IL K N++
Sbjct: 775 ASLENVDSWYQDINEIVNIIVSQRLISPTQLLDILGKSVNIK 816
>SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 308
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 615 VRLLRRVPPEIRQRVRLEALHRSIRFPALDGARRWTDILPARWTQSVNRHP 767
V +LRR P R VRL H+ +R P + D+ P + S HP
Sbjct: 163 VGMLRRFLPSSRM-VRLSKAHQPLRIPTTGVSLDSADLTPLSVSTSHLNHP 212
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 607 TQVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQI 726
T Y + CL++Y + WK T + D P++ +I
Sbjct: 31 TSKYAVHASCLQEYLDKEAWKDDTLIIDLRPVSEFSKSRI 70
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/39 (23%), Positives = 25/39 (64%)
Frame = +1
Query: 259 KELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQ 375
K +D+W + +E ++ T+ +++ L + +EIL + +++
Sbjct: 209 KSMDEWRKSTDEWRKSTDERLENLLNIVREILDVQRDMR 247
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 211 CTLITHTIIMEDKASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTK 360
C I T E +A+++ L +WI N+ K L + ++++ KE+ TK
Sbjct: 114 CRKIVMTYASEWRATVERLGRWIDFDNDYKTLYPSFMESVWWVFKELHTK 163
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 185 Y*VFNVHKIMRNNYFT 138
Y +F++ + M+NNYFT
Sbjct: 389 YFIFHIKRFMKNNYFT 404
>SPBC29B5.03c |rpl26||60S ribosomal protein L26|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 126
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 541 ALKVRYRERITILRGNHESRQ--ITQVY 618
+L VR ++IT++RG+++ R+ IT VY
Sbjct: 46 SLPVRRDDQITVIRGSNKGREGKITSVY 73
>SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subunit
Rad15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 708 RRQGQEIE*IGEVLPDGRVAVFPEALVVEAV 616
R G + ++ PDG VA FP L +E++
Sbjct: 517 RNYGNILVEFSKITPDGLVAFFPSYLYLESI 547
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,308,508
Number of Sequences: 5004
Number of extensions: 63154
Number of successful extensions: 202
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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