Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D11
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    25   1.0  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    25   1.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.1  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   5.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.6  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 155 SGKTTDTFEAKKGSLASSPDVEVRASIAPPGRTPFPKFQKYESDSE 292
           SG    +  A  G+L  SP ++ + +  PP R+P+   +K    S+
Sbjct: 92  SGSEMSSPGAGSGNL--SPQIQTQVARPPPARSPYEWIKKTSYQSQ 135


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 155 SGKTTDTFEAKKGSLASSPDVEVRASIAPPGRTPFPKFQKYESDSE 292
           SG    +  A  G+L  SP ++ + +  PP R+P+   +K    S+
Sbjct: 92  SGSEMSSPGAGSGNL--SPQIQTQVARPPPARSPYEWIKKTSYQSQ 135


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 806 LYKIKFNVINKLANKTIKYY 747
           + KI+F ++NK  N  I+Y+
Sbjct: 463 MLKIRFVILNKQINNLIEYF 482


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 806 LYKIKFNVINKLANKTIKYY 747
           + KI+F ++NK  N  I+Y+
Sbjct: 188 MLKIRFVILNKQINNLIEYF 207


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 164 TTDTFEAKKGSLASSPDVEVRASIAP 241
           T  T EA      S+P  EV  S+AP
Sbjct: 450 TVSTTEAPPAPAVSNPQNEVDGSVAP 475


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 684 SILT--FNIL*NKYLSFIMHYMKVIFYGLI 767
           SI+T  FN    K   FI+ +MK  F+G +
Sbjct: 66  SIVTIFFNFATKKLEQFIVRFMKYHFFGTL 95


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/56 (23%), Positives = 27/56 (48%)
 Frame = +2

Query: 173 TFEAKKGSLASSPDVEVRASIAPPGRTPFPKFQKYESDSETDSCGSEQQEEYLDNE 340
           +F+++K    S+P   V   +   G+ P    ++ ESD E  +   + ++   D+E
Sbjct: 50  SFKSRKPKNYSAPIGFVAGGVQQAGKKPENVKKEDESDEEKPTTSFKLKDSSSDSE 105


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 243 PEGRRSRSFKNTRVTVKQTLAGVNNK 320
           PE R    FKN R   +Q L    NK
Sbjct: 167 PESRVQVWFKNRRAKCRQQLQQQQNK 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,871
Number of Sequences: 336
Number of extensions: 3666
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)