Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D11
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0222 + 12928470-12928779,12931919-12932052,12932352-129325...    35   0.074

>04_03_0222 +
           12928470-12928779,12931919-12932052,12932352-12932548,
           12932807-12932999,12933078-12933467,12933544-12933623,
           12933757-12933851,12933869-12934077,12934150-12934206,
           12934466-12934549
          Length = 582

 Score = 35.1 bits (77), Expect = 0.074
 Identities = 25/80 (31%), Positives = 39/80 (48%)
 Frame = +2

Query: 170 DTFEAKKGSLASSPDVEVRASIAPPGRTPFPKFQKYESDSETDSCGSEQQEEYLDNELLH 349
           DT E  +GS+ +  +  V   +      P P   +Y  + E    G++  +E  D  LLH
Sbjct: 87  DTSETPEGSIDNEMNKGVDDEV--DDSLP-PVVSEYYQEGE--QLGADISQELGDESLLH 141

Query: 350 ESSIIEDIQTLYSERFEHIP 409
           ES+I+E + T+ S R  H P
Sbjct: 142 ESNIVEQLSTM-SRRHRHYP 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,931,768
Number of Sequences: 37544
Number of extensions: 301458
Number of successful extensions: 763
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)