Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D11
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    26   1.7  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       26   1.7  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       26   1.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   5.3  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.2  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 16/69 (23%), Positives = 32/69 (46%)
 Frame = +2

Query: 356 SIIEDIQTLYSERFEHIPVLRTPKRHVSXXXXXXXXXXXXDFDSPEYIELGDLQKNTYKN 535
           ++  D + +  E FEH  + R+ K +              D DS    ++GD  ++  ++
Sbjct: 289 TLSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEED 348

Query: 536 TTDKTSEEK 562
           +TD+T  E+
Sbjct: 349 STDETLIEE 357


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 16/69 (23%), Positives = 32/69 (46%)
 Frame = +2

Query: 356 SIIEDIQTLYSERFEHIPVLRTPKRHVSXXXXXXXXXXXXDFDSPEYIELGDLQKNTYKN 535
           ++  D + +  E FEH  + R+ K +              D DS    ++GD  ++  ++
Sbjct: 59  TLSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEED 118

Query: 536 TTDKTSEEK 562
           +TD+T  E+
Sbjct: 119 STDETLIEE 127


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 16/69 (23%), Positives = 32/69 (46%)
 Frame = +2

Query: 356 SIIEDIQTLYSERFEHIPVLRTPKRHVSXXXXXXXXXXXXDFDSPEYIELGDLQKNTYKN 535
           ++  D + +  E FEH  + R+ K +              D DS    ++GD  ++  ++
Sbjct: 59  TLSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEED 118

Query: 536 TTDKTSEEK 562
           +TD+T  E+
Sbjct: 119 STDETLIEE 127


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 253 RPSGWRD*GPYFNIW*RSQRAFLC 182
           +P GWR    Y+N+W     A  C
Sbjct: 598 KPVGWRPTFKYYNMWLSLLGAIFC 621


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 246 EGRRSRSFKNTRVTVKQTLAGVNNKKNTW 332
           +GR S+ FK+   TVK  +  V +    W
Sbjct: 230 DGRTSKGFKSEWATVKDQVLYVGSMGKEW 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,352
Number of Sequences: 2352
Number of extensions: 14434
Number of successful extensions: 160
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)