Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D10
         (899 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    30   0.025
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   1.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 30.3 bits (65), Expect = 0.025
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 504 IPKHDQTGDVVILGPAESNVKAARRRINMIIMSSXDETNI 623
           IP HD T DV+++G         RRR++  + SS +E N+
Sbjct: 413 IPLHDATRDVILVGEQARAQDGLRRRMDK-LKSSIEEANL 451


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +3

Query: 183 QSNLDNCLKKIKMLRNLKPE 242
           +++L NCL+K+K+L  L PE
Sbjct: 61  RAHLRNCLEKLKVLVPLGPE 80


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 899 TXPQSDXQRNGXXNNGM--TIVSXXLRSKDLLLVFFHHC 789
           T  +   Q++G  ++ +  T+VS  L+ +DLL  F H C
Sbjct: 305 TNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 343


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 899 TXPQSDXQRNGXXNNGM--TIVSXXLRSKDLLLVFFHHC 789
           T  +   Q++G  ++ +  T+VS  L+ +DLL  F H C
Sbjct: 220 TNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 258


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 899 TXPQSDXQRNGXXNNGM--TIVSXXLRSKDLLLVFFHHC 789
           T  +   Q++G  ++ +  T+VS  L+ +DLL  F H C
Sbjct: 539 TNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 577


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,077
Number of Sequences: 438
Number of extensions: 4058
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)