Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_D08
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.36
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.36
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.36
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.36
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 32 0.63
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.63
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.63
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.63
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -2
Query: 805 GGXPPPXKKKXXXGXGXXXXGGGXXPPXXFFXPPPXXLXXXPXXXXGXXXXPPXXXGXXG 626
GG PPP G G PP PPP P G PP G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 625 XPP 617
PP
Sbjct: 771 PPP 773
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Frame = +1
Query: 619 GGXPSXPXXXGXKX----PXPXXXGGXFXXXXGGXKKXPX--GXXPPPPXXGPPXPXXFF 780
GG P P G P P G GG P G PPPP PP P F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGGF- 780
Query: 781 FXXGGGXPXP 810
GG P P
Sbjct: 781 --KGGPPPPP 788
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = -1
Query: 803 GXPPPXXKKKXXGXGGPXXGGGGXXPXGFFFXPPXIXXXXPPXXXGXGXXXPXXXGXXGX 624
G PPP G P GG P PP PP G P G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 623 PPXXXXXXXXXXXXXPP 573
PP PP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -2
Query: 805 GGXPPPXKKKXXXGXGXXXXGGGXXPPXXFFXPPPXXLXXXPXXXXGXXXXPPXXXGXXG 626
GG PPP G G PP PPP P G PP G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 625 XPP 617
PP
Sbjct: 771 PPP 773
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Frame = +1
Query: 619 GGXPSXPXXXGXKX----PXPXXXGGXFXXXXGGXKKXPX--GXXPPPPXXGPPXPXXFF 780
GG P P G P P G GG P G PPPP PP P F
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGGF- 780
Query: 781 FXXGGGXPXP 810
GG P P
Sbjct: 781 --KGGPPPPP 788
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = -1
Query: 803 GXPPPXXKKKXXGXGGPXXGGGGXXPXGFFFXPPXIXXXXPPXXXGXGXXXPXXXGXXGX 624
G PPP G P GG P PP PP G P G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 623 PPXXXXXXXXXXXXXPP 573
PP PP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 394 GGXGXXPPXPXGXPNFXXXXSPXXGSXXXF*XPPPXXGGGXXGXDP 257
GG G P P G P P G F PPP G G G P
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGF-GPPPPGGPGAYGPPP 448
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -2
Query: 805 GGXPPPXKKKXXXGXGXXXXGGGXXPPXXFFXPPPXXLXXXPXXXXGXXXXPPXXXGXXG 626
GG PPP G G PP PPP P G PP G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 625 XPP 617
PP
Sbjct: 354 PPP 356
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Frame = +1
Query: 619 GGXPSXPXXXGXKX----PXPXXXGGXFXXXXGGXKKXPX--GXXPPPPXXGPPXPXXFF 780
GG P P G P P G GG P G PPPP PP P F
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP--PPPPGGF- 363
Query: 781 FXXGGGXPXP 810
GG P P
Sbjct: 364 --KGGPPPPP 371
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = -1
Query: 803 GXPPPXXKKKXXGXGGPXXGGGGXXPXGFFFXPPXIXXXXPPXXXGXGXXXPXXXGXXGX 624
G PPP G P GG P PP PP G P G
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 623 PPXXXXXXXXXXXXXPP 573
PP PP
Sbjct: 355 PPPPPPGGFKGGPPPPP 371
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 767 GXGGPXXGGGGXXPXGFFFXPPXIXXXXPPXXXG 666
G GGP GGGG P G+ PP P G
Sbjct: 188 GPGGPGSGGGGGGPGGYPSAPPPYDDYSKPPPYG 221
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 622 GXPSXPXXXGXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
G P P G P P G G P G PPPP G P P
Sbjct: 253 GSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 631 SXPXXXGXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
S P P P G G P G PPPP G P P
Sbjct: 246 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 649 GXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
G P P G G P PPPP G P P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 622 GXPSXPXXXGXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
G P P G P P G G P G PPPP G P P
Sbjct: 274 GSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 631 SXPXXXGXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
S P P P G G P G PPPP G P P
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 649 GXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
G P P G G P PPPP G P P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 622 GXPSXPXXXGXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
G P P G P P G G P G PPPP G P P
Sbjct: 259 GSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 631 SXPXXXGXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
S P P P G G P G PPPP G P P
Sbjct: 252 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 649 GXKXPXPXXXGGXFXXXXGGXKKXPXGXXPPPPXXGPPXP 768
G P P G G P PPPP G P P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/85 (27%), Positives = 23/85 (27%)
Frame = -3
Query: 885 PPPPPPXFGXXXXFXXXXXXXXXXXXXGGPPPXXKKKXXXGGGXXXGGGGXXPPXXFFXP 706
PPPPPP G GG GGG GGGG P
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPP 113
Query: 705 PXXXXKXXPXXXGXGXFXPXXGXGG 631
P G G G GG
Sbjct: 114 PPPACGGGCGGGGGGCGGGCGGGGG 138
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +3
Query: 276 PPPXXGGGX*KXXXEPXXGDXKXXKXGXPXGXGGXKPXPPLXXKGXXGXXP 428
PPP GGG P G + G P G G P P + G P
Sbjct: 1482 PPPMRGGGPPMRGGPPMRGGPPMFR-GGPPGPGRGMPSPMMRGSSMRGGFP 1531
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +1
Query: 721 PXGXXPPPPXXG--PPXPXXFFFXXGGGXPXP 810
P G PPPP G PP P F GG P P
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMF----AGGIPPP 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,928,895
Number of Sequences: 27780
Number of extensions: 356859
Number of successful extensions: 1914
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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