Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D06
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   1.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   4.2  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   4.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   5.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = -1

Query: 553 LYNLIFIYCC 524
           ++NL+++YCC
Sbjct: 154 IFNLVYVYCC 163


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 679 RTGCFPYIKYHCSRKKAEDLNMSDKFMRIXK 771
           +TG  PY+++ C   +     ++D + +I K
Sbjct: 262 QTGLSPYLRFGCLSTRLFYYQLTDLYKKIKK 292


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -1

Query: 616 LSHNCTEKNEYYYTVIDV*IVLYNLIFIY 530
           L H  T ++ + +T IDV I+L +  F++
Sbjct: 90  LVHAITIRSTFSWTFIDVFIMLTSTAFVF 118


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 353 YMRRYHKHDLEEIISS*NYFKVRNVCFIFKPIC 255
           Y  +Y   DL+EII S    K    C + K  C
Sbjct: 24  YTTKYDNVDLDEIIKSDRLLKNYVNCLLEKGKC 56


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 797 KQGIPKFATXIILINLS 747
           KQG+P+ AT I L +L+
Sbjct: 30  KQGVPREATKITLSSLA 46


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 858  FACVNKFFMPYKLGCC 811
            F C N+ F P K+  C
Sbjct: 1109 FGCSNRCFFPSKIRIC 1124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,940
Number of Sequences: 336
Number of extensions: 4798
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)