Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D06
         (877 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040594-1|AAH40594.1|  586|Homo sapiens zinc finger protein 92 ...    36   0.15 
BC036439-1|AAH36439.1|  517|Homo sapiens zinc finger protein 92 ...    36   0.15 
AK091618-1|BAC03708.1|  586|Homo sapiens protein ( Homo sapiens ...    36   0.15 

>BC040594-1|AAH40594.1|  586|Homo sapiens zinc finger protein 92
           protein.
          Length = 586

 Score = 36.3 bits (80), Expect = 0.15
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +1

Query: 556 LFRHLLQYNNIHSFQYSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAED 735
           +   L Q+  IH+ +YSY K ++ G + FNW    + ++I+ TG  PY    C +     
Sbjct: 184 MLSQLTQHKKIHTREYSY-KCEECGKA-FNWSSTLTKHKIIHTGEKPYKCEECGKAFNRS 241

Query: 736 LNMSDKFMRIXKVANLGIPCLLYGLA---ATQLIRHEELVHTSKGP 864
            N++    +I         C   G A   ++ L +H+  +HT + P
Sbjct: 242 SNLTKH--KIIHTGEKPYKCEECGKAFNRSSTLTKHKR-IHTEEKP 284


>BC036439-1|AAH36439.1|  517|Homo sapiens zinc finger protein 92
           protein.
          Length = 517

 Score = 36.3 bits (80), Expect = 0.15
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +1

Query: 556 LFRHLLQYNNIHSFQYSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAED 735
           +   L Q+  IH+ +YSY K ++ G + FNW    + ++I+ TG  PY    C +     
Sbjct: 115 MLSQLTQHKKIHTREYSY-KCEECGKA-FNWSSTLTKHKIIHTGEKPYKCEECGKAFNRS 172

Query: 736 LNMSDKFMRIXKVANLGIPCLLYGLA---ATQLIRHEELVHTSKGP 864
            N++    +I         C   G A   ++ L +H+  +HT + P
Sbjct: 173 SNLTKH--KIIHTGEKPYKCEECGKAFNRSSTLTKHKR-IHTEEKP 215


>AK091618-1|BAC03708.1|  586|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34299 fis, clone FEBRA2006372, moderately
           similar to ZINC FINGER PROTEIN 85. ).
          Length = 586

 Score = 36.3 bits (80), Expect = 0.15
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +1

Query: 556 LFRHLLQYNNIHSFQYSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAED 735
           +   L Q+  IH+ +YSY K ++ G + FNW    + ++I+ TG  PY    C +     
Sbjct: 184 MLSQLTQHKKIHTREYSY-KCEECGKA-FNWSSTLTKHKIIHTGEKPYKCEECGKAFNRS 241

Query: 736 LNMSDKFMRIXKVANLGIPCLLYGLA---ATQLIRHEELVHTSKGP 864
            N++    +I         C   G A   ++ L +H+  +HT + P
Sbjct: 242 SNLTKH--KIIHTGEKPYKCEECGKAFNRSSTLTKHKR-IHTEEKP 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,175,164
Number of Sequences: 237096
Number of extensions: 2295087
Number of successful extensions: 2737
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2737
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)