Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D06
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3059|ABI31192.1|  105|Drosophila melanogaster CG34148-P...    75   1e-13

>AE014297-3059|ABI31192.1|  105|Drosophila melanogaster CG34148-PA
           protein.
          Length = 105

 Score = 75.4 bits (177), Expect = 1e-13
 Identities = 31/55 (56%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = +1

Query: 610 VKDDQFGMSNFNWKVGN-SNYQILRTGCFPYIKYHCSRKKAEDLNMSDKFMRIXK 771
           V +DQ GMS+FNW + N +NY ILRT C+PY+KYHCS+++ +DL + DKF R  K
Sbjct: 38  VANDQRGMSHFNWTLENGTNYHILRTACYPYMKYHCSKREVQDLWLEDKFFRFLK 92



 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 384 IARFSNKPTSSEVLTAYLTQCNEPPWTSYFVK 479
           + R   KP +SEVLTAYL QC+EPPWTSYFVK
Sbjct: 3   LTRLLLKPRASEVLTAYLKQCHEPPWTSYFVK 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,765,811
Number of Sequences: 53049
Number of extensions: 700191
Number of successful extensions: 917
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)