Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D03
         (836 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0490 + 22672241-22674679                                         31   0.86 
03_06_0422 + 33818887-33819996                                         29   3.5  
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192...    29   4.6  
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535...    29   6.1  
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247     28   8.0  

>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +2

Query: 269 RPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPP 412
           +P + + T+T  P  L    R+W   + E+VLEQ S    + MP  PP
Sbjct: 296 QPQQPVETVTPTPPPLAR-SRRWNPEMLEVVLEQESRVEETTMPPPPP 342


>03_06_0422 + 33818887-33819996
          Length = 369

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -3

Query: 513 ESEEQQERHHKTEQTHGLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTS 343
           E   ++ER  + E+T  L    + N   E ++L+G       D+  +D SNTSSG S
Sbjct: 156 ERMRERERERRRERTESLILINSNN---EAIILQGT---FGPDDNQDDSSNTSSGVS 206


>01_07_0198 -
           41918276-41918408,41918486-41918841,41919091-41919237,
           41919666-41921789,41922150-41922344,41922488-41922568,
           41923325-41923414,41923507-41923593,41923914-41923961
          Length = 1086

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 203 AASGRTSAELQKMADLAAWGDQSGGR 126
           +  GR +A + K  ++ +WG++SGGR
Sbjct: 310 SCGGRHAALVTKQGEIYSWGEESGGR 335


>11_08_0007 +
           27551173-27551828,27552071-27552282,27553371-27553550,
           27555154-27556187
          Length = 693

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -3

Query: 369 CSNTSSGTSYSHCRCT---STNEF--GSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGY 205
           C N ++G  Y  C C+   S N +  G  +N+       EGP        SR +   GGY
Sbjct: 261 CVNATNGKGYL-CNCSAGYSGNPYVTGGCININECELRREGPAMYPCYSGSRCYDTEGGY 319

Query: 204 SCK 196
            CK
Sbjct: 320 KCK 322


>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
          Length = 974

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
 Frame = -3

Query: 561 LICRMXVVVFLKVNSLESEEQQERHHKTEQTHGLRQGETQNGV*EQLLLEGGVPGIADDE 382
           L C + +   +   +  ++       +T   +   Q  T NG  E L   GG   ++ + 
Sbjct: 331 LACIIVLKAIISCQTYSNDRSNNVEEQTSTGNCRAQINTSNGGAESLSSNGGAESVSSNG 390

Query: 381 GAEDCSNTSSG--TSYSHCRCTSTNEFGSRVN 292
           GAE  S+ +    T+ +    T T+  G++ N
Sbjct: 391 GAESVSSNARAQPTTTNGGEETKTSNAGAQKN 422


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,198,571
Number of Sequences: 37544
Number of extensions: 397551
Number of successful extensions: 1385
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)