Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_D02
         (963 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TJV9 Cluster: Putative uncharacterized protein; n=1; ...    40   0.13 
UniRef50_Q8WYQ3 Cluster: CHCH domain-containing protein C22orf16...    40   0.13 
UniRef50_Q03667 Cluster: Uncharacterized protein YMR002W; n=10; ...    39   0.22 
UniRef50_Q4V6F6 Cluster: IP04476p; n=2; Sophophora|Rep: IP04476p...    38   0.51 
UniRef50_Q5DDK5 Cluster: Putative uncharacterized protein; n=1; ...    35   3.6  

>UniRef50_A7TJV9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 167

 Score = 39.5 bits (88), Expect = 0.13
 Identities = 19/36 (52%), Positives = 21/36 (58%)
 Frame = -2

Query: 761 TAGGVTVXSAXGXMAGSAXTGMFSGGGXSXPAXQQQ 654
           TA GV V SA G   G+  TGMFSG G +    QQQ
Sbjct: 72  TAAGVAVGSAVGHTIGAGITGMFSGSGSNESVQQQQ 107


>UniRef50_Q8WYQ3 Cluster: CHCH domain-containing protein C22orf16,
           mitochondrial precursor; n=14; Coelomata|Rep: CHCH
           domain-containing protein C22orf16, mitochondrial
           precursor - Homo sapiens (Human)
          Length = 142

 Score = 39.5 bits (88), Expect = 0.13
 Identities = 22/37 (59%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 761 TAGGVTVXSAXGXMAGSAXTGMFSGGG--XSXPAXQQ 657
           TA GV V SA G + GSA TG FSGG    S PA QQ
Sbjct: 51  TAAGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQ 87


>UniRef50_Q03667 Cluster: Uncharacterized protein YMR002W; n=10;
           Ascomycota|Rep: Uncharacterized protein YMR002W -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 156

 Score = 38.7 bits (86), Expect = 0.22
 Identities = 21/41 (51%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 761 TAGGVTVXSAXGXMAGSAXTGMFSG-GGXSXPAXQQQAGXA 642
           TA GV V S  G   G+  TGMFSG G  S P  QQQ   A
Sbjct: 62  TAAGVAVGSTIGHTLGAGITGMFSGSGSDSAPVEQQQQNMA 102


>UniRef50_Q4V6F6 Cluster: IP04476p; n=2; Sophophora|Rep: IP04476p -
           Drosophila melanogaster (Fruit fly)
          Length = 176

 Score = 37.5 bits (83), Expect = 0.51
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -2

Query: 761 TAGGVTVXSAXGXMAGSAXTGMFSGGGXSXPAXQQ 657
           TA GV   SA G   G+  TGMF G G + PA +Q
Sbjct: 79  TAAGVAAGSAVGHAVGAGLTGMFQGRGQAAPAKEQ 113


>UniRef50_Q5DDK5 Cluster: Putative uncharacterized protein; n=1;
           Schistosoma japonicum|Rep: Putative uncharacterized
           protein - Schistosoma japonicum (Blood fluke)
          Length = 128

 Score = 34.7 bits (76), Expect = 3.6
 Identities = 19/32 (59%), Positives = 20/32 (62%)
 Frame = -2

Query: 761 TAGGVTVXSAXGXMAGSAXTGMFSGGGXSXPA 666
           TAGGV V    G + GSA TG FSGG  S PA
Sbjct: 47  TAGGVAV----GHVVGSAITGAFSGGAGSSPA 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 311,847,882
Number of Sequences: 1657284
Number of extensions: 2779218
Number of successful extensions: 4976
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4917
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89407040613
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)