Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C24
         (919 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.20 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   1.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   7.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   7.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 259 VVELGGYLRI-QAILNKFVVIFCPANIRILPSYLIIGYFSIALRHSINF 116
           +VE+GG+L   + +L KFV ++ P  + ++ S +++       RH  NF
Sbjct: 137 IVEIGGWLAFTKQLLIKFVEVY-PLFVLLIVSNVVLKILVEKYRHQKNF 184


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 413 HTKKHFYWIHVRDLNLKIV 357
           +T + +YW++V  LNL IV
Sbjct: 50  NTNRKYYWLNVCCLNLSIV 68


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 519 CFIFSSSGPLTCTVGVR 469
           C IF +   LTC  G+R
Sbjct: 40  CIIFGAIATLTCIEGLR 56


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 519 CFIFSSSGPLTCTVGVR 469
           C IF +   LTC  G+R
Sbjct: 36  CIIFGAIATLTCIEGLR 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,332
Number of Sequences: 336
Number of extensions: 3510
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)