Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C24
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0192 - 15308602-15308869,15309457-15309528,15310271-153103...    33   0.42 
12_02_0871 + 23865343-23866016,23866122-23866170,23866276-238663...    31   1.3  
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428...    30   2.2  
05_04_0067 - 17630054-17630269                                         29   5.2  
04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753...    28   9.0  

>03_03_0192 -
           15308602-15308869,15309457-15309528,15310271-15310337,
           15310449-15310528,15310636-15310714,15310815-15310890
          Length = 213

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3

Query: 663 DELIPLFERCGTIWDLRLMMDPMTG 737
           D+L+ LF+RCG + D+R+  D  TG
Sbjct: 30  DDLLALFDRCGEVLDIRIPRDRRTG 54


>12_02_0871 +
           23865343-23866016,23866122-23866170,23866276-23866356,
           23866599-23866718,23866957-23867055,23867135-23867194,
           23867316-23867410,23867483-23867508,23869212-23869285,
           23870194-23870259,23871027-23871099,23871585-23871622,
           23873758-23873871,23876079-23876195,23876288-23876368,
           23876468-23876536,23876631-23876669,23876809-23876973,
           23877380-23877484,23877569-23877637,23877754-23877816,
           23877903-23878021,23878124-23878348,23878409-23878610
          Length = 940

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
 Frame = +2

Query: 101 SATTSKINRMAEGNGEISYDEVAGKD---SDVGRTEDYHKLIEYGLDPKVAAKLDDIYKT 271
           + +T K +      G  SYD  A      ++V  T+ Y   +   L   V   L  I + 
Sbjct: 650 NVSTDKPDHSYGRRGHDSYDRQAKAPRLYNEVSDTDPYEAAV-VSLPSAVKELLLRILRL 708

Query: 272 GKLAHAELDERALDALKEFPSDGALSVLGQFLDSNLEHVSNKSAFLCGVMKTYRQKS 442
                 ++D   + +L E P   A++VL QFL S  +   NK  +   ++  Y+ ++
Sbjct: 709 RIGTRYDIDIHCIRSLNELPEKAAVAVLNQFLISGADK-HNKGDYFASLIAKYQAET 764


>07_01_0577 -
           4286048-4286186,4286600-4286660,4286957-4287089,
           4287286-4287350,4288346-4288451,4288529-4288750,
           4289619-4289852,4289948-4290037,4290605-4291507
          Length = 650

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 651 DMYEDELIPLFERCGTIWDLRLMMDPMTGAN 743
           D  ED++  +F + G I ++R++M+P+ G N
Sbjct: 246 DAKEDDVRAVFAKAGEITEVRMIMNPLAGKN 276


>05_04_0067 - 17630054-17630269
          Length = 71

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 651 DMYEDELIPLFERCGTIWDLRLMMDPMTGAN 743
           D+Y   L+ ++ +CG + D R++ + M   N
Sbjct: 13  DLYVSSLVDMYAKCGRVRDARMIFEAMPSRN 43


>04_04_0674 +
           27173948-27174188,27174704-27175260,27175310-27175399,
           27175475-27175714,27175801-27176022,27176124-27176433,
           27176528-27176847,27176906-27177021,27177133-27177227,
           27177331-27177407,27177520-27177615
          Length = 787

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 651 DMYEDELIPLFERCGTIWDLRLMMDPMTGAN 743
           D  E +L  +F   G I ++RLMM+P+T  N
Sbjct: 200 DATESDLRKVFGEVGEITEVRLMMNPVTKKN 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,976,942
Number of Sequences: 37544
Number of extensions: 417355
Number of successful extensions: 1076
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)