Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C24
         (919 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    24   7.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   7.4  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   7.4  

>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 96  LSRPQLAKLIEWRRAMEK 149
           L + +  KL++WR  MEK
Sbjct: 199 LDKERFGKLLQWRELMEK 216


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 407 LCGVMKTYRQKSRAGVPGAPALTPTV-QVKGPDEE 508
           L G +    +K   GVPG+P L  TV  +KG   E
Sbjct: 446 LTGPVGLSGRKGDRGVPGSPGLPATVAAIKGDKGE 480


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 289 RVGRACSRCLKRISIRRCFKCSWTIFRFKSRTC 387
           R+G +      +I  RRCFKC W    F SR C
Sbjct: 401 RIGWSICPVKIQIPKRRCFKC-WETGHF-SRDC 431


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,279
Number of Sequences: 2352
Number of extensions: 15426
Number of successful extensions: 64
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)