Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_C22
(872 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 75 3e-12
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 60 5e-08
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 58 2e-07
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 48 2e-04
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 46 0.001
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 44 0.005
UniRef50_Q49549 Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 -... 38 0.25
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 38 0.25
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 37 0.58
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 36 1.0
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 35 2.3
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 35 3.1
UniRef50_Q12IA3 Cluster: Putative uncharacterized protein precur... 33 7.2
UniRef50_A3ZU56 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 33 9.5
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/79 (51%), Positives = 44/79 (55%)
Frame = +1
Query: 604 PKLPNPSQQFPKLKIAXXXXXXXXXXXXXXXXPVTKALKAQRKVVKGEHGKRVRKIRNSV 783
P P P+ KLKIA PV KALK Q+KVVKGEHGKRVRKIR SV
Sbjct: 121 PAKPKPAAA--KLKIAPKPKKTGIKGQKKVVKPVVKALKIQKKVVKGEHGKRVRKIRTSV 178
Query: 784 HFRRPRRLNLLGTXKYPXK 840
HFRRP+ KYP K
Sbjct: 179 HFRRPKTFEPPRNPKYPRK 197
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 60.5 bits (140), Expect = 5e-08
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 700 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
PV KALKAQ+K++KG G RVRKIR SVHF RP+ KYP K
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRK 154
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/47 (57%), Positives = 30/47 (63%)
Frame = +1
Query: 700 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
PV KAL Q+KV+KG G R RKIRNSVHF RP+ KYP K
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRK 187
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
KALKA++ V+KG H + +KIR S FRRP+ L L KYP K
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
KALKA++ V+KG H + +KI S FRRP+ L L KYP K
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWK 63
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1
Query: 700 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
P KA A++ VVKG +GK+ K+R S FR P+ L L KY K
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASK 49
>UniRef50_Q49549 Cluster: P3; n=1; Mycoplasma hyorhinis|Rep: P3 -
Mycoplasma hyorhinis
Length = 1187
Score = 38.3 bits (85), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 200 TCVSQNTGTCPESSCACPETSCACPE 277
+C ++ G C E SCACP T+CAC E
Sbjct: 380 SCAQEHCG-CQEESCACPNTTCACTE 404
Score = 38.3 bits (85), Expect = 0.25
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 200 TCVSQNTGTCPESSCACPETSCACPE 277
+C ++ G C E SCACP T+CAC E
Sbjct: 836 SCAQEHCG-CQEESCACPNTTCACTE 860
Score = 34.3 bits (75), Expect = 4.1
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 200 TCVSQN-TGTCPESSCACPETSCACPET 280
TC Q T +C + C C E SCACP T
Sbjct: 371 TCGCQEATCSCAQEHCGCQEESCACPNT 398
Score = 34.3 bits (75), Expect = 4.1
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 200 TCVSQN-TGTCPESSCACPETSCACPET 280
TC Q T +C + C C E SCACP T
Sbjct: 827 TCGCQEATCSCAQEHCGCQEESCACPNT 854
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 38.3 bits (85), Expect = 0.25
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
KALKA++ +KG H +K R S+ F+RP+ L +YP K
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWK 63
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 37.1 bits (82), Expect = 0.58
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 712 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
ALK ++ ++G H R RKI V FRRP+ KY K
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRK 85
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 36.3 bits (80), Expect = 1.0
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
+A KA + +KG H + K+R S F RP+ L L KYP K
Sbjct: 19 QAKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRK 62
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 35.1 bits (77), Expect = 2.3
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
KA A V KG K RK+R SV FRRP LN YP +
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRR 76
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 34.7 bits (76), Expect = 3.1
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 703 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPR 801
V +ALKAQ+ + G H K +K+ ++ FRRP+
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPK 98
>UniRef50_Q12IA3 Cluster: Putative uncharacterized protein
precursor; n=1; Shewanella denitrificans OS217|Rep:
Putative uncharacterized protein precursor - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 149
Score = 33.5 bits (73), Expect = 7.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 209 SQNTGTCPESSCACPETSC 265
SQN+G C E+SC CP +SC
Sbjct: 87 SQNSGDCCENSCRCPVSSC 105
>UniRef50_A3ZU56 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 155
Score = 33.1 bits (72), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 200 TCVSQNTGTCPESSCACPETSCACPE 277
TC + PE +C PE SCA PE
Sbjct: 94 TCCAPEPACAPEPTCCAPEPSCAAPE 119
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 33.1 bits (72), Expect = 9.5
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 709 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPRRLNLLGTXKYP 834
+ALKAQ+ ++ HG RV +KIR +VHF RP+ L YP
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYP 46
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,516,359
Number of Sequences: 1657284
Number of extensions: 6447120
Number of successful extensions: 18666
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18637
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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