Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C22
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a pr...    48   3e-05
U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a pr...    48   3e-05
U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a pr...    48   3e-05
L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens (c...    48   3e-05
BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a ...    48   3e-05
BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a ...    48   3e-05
AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A ...    48   3e-05
BC098172-1|AAH98172.1|  130|Homo sapiens RPL23AP13 protein protein.    47   1e-04
BC096740-1|AAH96740.1|  130|Homo sapiens RPL23AP13 protein protein.    47   1e-04
BC096706-1|AAH96706.1|  130|Homo sapiens RPL23AP13 protein protein.    47   1e-04
AC092839-2|AAX93105.1|  130|Homo sapiens unknown protein.              47   1e-04
AE006463-8|AAK61228.1|  156|Homo sapiens 60S ribosomal protein L...    38   0.036

>U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG H  + +KIR S  FRRP+ L L    KYP K
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63


>U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG H  + +KIR S  FRRP+ L L    KYP K
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63


>U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG H  + +KIR S  FRRP+ L L    KYP K
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63


>L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens
           (clone 01) liver expressed protein mRNA, 3'end. ).
          Length = 147

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG H  + +KIR S  FRRP+ L L    KYP K
Sbjct: 11  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 54


>BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG H  + +KIR S  FRRP+ L L    KYP K
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63


>BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG H  + +KIR S  FRRP+ L L    KYP K
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63


>AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A
           protein.
          Length = 156

 Score = 48.4 bits (110), Expect = 3e-05
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG H  + +KIR S  FRRP+ L L    KYP K
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK 63


>BC098172-1|AAH98172.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG HG + +KIR S  F+RP+ L L    +YP K
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRK 63


>BC096740-1|AAH96740.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG HG + +KIR S  F+RP+ L L    +YP K
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRK 63


>BC096706-1|AAH96706.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG HG + +KIR S  F+RP+ L L    +YP K
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRK 63


>AC092839-2|AAX93105.1|  130|Homo sapiens unknown protein.
          Length = 130

 Score = 46.8 bits (106), Expect = 1e-04
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++ V+KG HG + +KIR S  F+RP+ L L    +YP K
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRK 63


>AE006463-8|AAK61228.1|  156|Homo sapiens 60S ribosomal protein L23A
           like protein.
          Length = 156

 Score = 38.3 bits (85), Expect = 0.036
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           KALKA++  +KG H    +K R S+ F+RP+ L      +YP K
Sbjct: 20  KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWK 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,233,154
Number of Sequences: 237096
Number of extensions: 1157313
Number of successful extensions: 2679
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2679
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)