Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C22
         (872 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    54   3e-07
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    54   3e-07
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    53   6e-07
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    47   3e-05
BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    31   2.7  
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    31   2.7  
AY061487-1|AAL29035.1|  749|Drosophila melanogaster LD45152p pro...    29   6.3  
AE014134-540|AAF51159.2|  749|Drosophila melanogaster CG3605-PA ...    29   6.3  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 24/43 (55%), Positives = 29/43 (67%)
 Frame = +1

Query: 712 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           A K Q+K++KG  G R RKIR +VHFRRP  L L  + KYP K
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRK 176


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 53.6 bits (123), Expect = 3e-07
 Identities = 24/43 (55%), Positives = 29/43 (67%)
 Frame = +1

Query: 712 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           A K Q+K++KG  G R RKIR +VHFRRP  L L  + KYP K
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRK 184


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 24/43 (55%), Positives = 29/43 (67%)
 Frame = +1

Query: 712 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           A K Q+K++KG  G R RKIR +VHFRRP  L L  + KYP K
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRK 184


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 23/43 (53%), Positives = 28/43 (65%)
 Frame = +1

Query: 712 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXK 840
           A K Q+K++K   G R RKIR +VHFRRP  L L  + KYP K
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRK 176


>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 750 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 658
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 750 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 658
           M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AY061487-1|AAL29035.1|  749|Drosophila melanogaster LD45152p
           protein.
          Length = 749

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXKXCLXKSHG 864
           K  KA+R   K +  K+ RKIR+ + F R ++L      +   K    K+HG
Sbjct: 124 KQSKAERNKKKKKRKKQNRKIRHQIEFARQQQLAQAEENEPEAKDSETKAHG 175


>AE014134-540|AAF51159.2|  749|Drosophila melanogaster CG3605-PA
           protein.
          Length = 749

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +1

Query: 709 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPRRLNLLGTXKYPXKXCLXKSHG 864
           K  KA+R   K +  K+ RKIR+ + F R ++L      +   K    K+HG
Sbjct: 124 KQSKAERNKKKKKRKKQNRKIRHQIEFARQQQLAQAEENEPEAKDSETKAHG 175


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,674,147
Number of Sequences: 53049
Number of extensions: 308812
Number of successful extensions: 973
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)