Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C20
         (913 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017777-12|AAC28405.1|  145|Drosophila melanogaster la costa pr...    31   2.2  
AE014298-3140|AAF50816.1|  145|Drosophila melanogaster CG12794-P...    31   2.2  
BT003763-1|AAO41442.1|  652|Drosophila melanogaster RE39251p pro...    30   5.1  
AY069625-1|AAL39770.1|  268|Drosophila melanogaster LD39545p pro...    30   5.1  
AE014296-964|AAN12098.1|  682|Drosophila melanogaster CG10625-PC...    30   5.1  
AE014296-963|AAF50773.2|  682|Drosophila melanogaster CG10625-PB...    30   5.1  
AE014296-962|AAN12097.1|  268|Drosophila melanogaster CG10625-PD...    30   5.1  
AE014296-961|AAN12096.1|  268|Drosophila melanogaster CG10625-PA...    30   5.1  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.8  
M14645-1|AAA28987.1|  450|Drosophila melanogaster protein ( D.me...    29   8.8  
M14643-1|AAA28985.1|  450|Drosophila melanogaster protein ( D.me...    29   8.8  
BT016118-1|AAV37003.1|  450|Drosophila melanogaster LD07757p pro...    29   8.8  
BT012506-1|AAS93777.1|  450|Drosophila melanogaster AT25469p pro...    29   8.8  
BT003630-1|AAO39634.1|  450|Drosophila melanogaster AT26363p pro...    29   8.8  
AY084208-1|AAL89946.1|  450|Drosophila melanogaster SD07763p pro...    29   8.8  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.8  
AE014297-627|AAN13341.1|  450|Drosophila melanogaster CG2512-PB,...    29   8.8  
AE014297-626|AAF54007.1|  450|Drosophila melanogaster CG2512-PA,...    29   8.8  
AE014297-554|AAF54067.1|  450|Drosophila melanogaster CG1913-PA ...    29   8.8  

>AF017777-12|AAC28405.1|  145|Drosophila melanogaster la costa
           protein.
          Length = 145

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = -2

Query: 849 PGXGPXGXGXTGGXGXXAQXGXXXPXXXXEXPTGXGXEKAPRXPEG 712
           PG GP G G  GG G     G   P      P G G    P  P G
Sbjct: 42  PGRGPGGPGGPGGRGPGGPGGPGGPGGPG-GPGGPGGPGGPGCPGG 86


>AE014298-3140|AAF50816.1|  145|Drosophila melanogaster CG12794-PA
           protein.
          Length = 145

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = -2

Query: 849 PGXGPXGXGXTGGXGXXAQXGXXXPXXXXEXPTGXGXEKAPRXPEG 712
           PG GP G G  GG G     G   P      P G G    P  P G
Sbjct: 42  PGRGPGGPGGPGGRGPGGPGGPGGPGGPG-GPGGPGGPGGPGCPGG 86


>BT003763-1|AAO41442.1|  652|Drosophila melanogaster RE39251p
           protein.
          Length = 652

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
 Frame = +2

Query: 713 PSGKRGAFSXPXPVGXSXXXXGXXXPXWAXXPNPPVXPXPXGP-XPGXXXXXXPP 874
           P+G  G    P P G      G   P     P PP  P P GP  PG      PP
Sbjct: 519 PNGPPGPPGPPGPPGPPGPK-GPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPP 572


>AY069625-1|AAL39770.1|  268|Drosophila melanogaster LD39545p
           protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
 Frame = +2

Query: 713 PSGKRGAFSXPXPVGXSXXXXGXXXPXWAXXPNPPVXPXPXGP-XPGXXXXXXPP 874
           P+G  G    P P G      G   P     P PP  P P GP  PG      PP
Sbjct: 135 PNGPPGPPGPPGPPGPPGPK-GPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPP 188


>AE014296-964|AAN12098.1|  682|Drosophila melanogaster CG10625-PC,
           isoform C protein.
          Length = 682

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
 Frame = +2

Query: 713 PSGKRGAFSXPXPVGXSXXXXGXXXPXWAXXPNPPVXPXPXGP-XPGXXXXXXPP 874
           P+G  G    P P G      G   P     P PP  P P GP  PG      PP
Sbjct: 549 PNGPPGPPGPPGPPGPPGPK-GPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPP 602


>AE014296-963|AAF50773.2|  682|Drosophila melanogaster CG10625-PB,
           isoform B protein.
          Length = 682

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
 Frame = +2

Query: 713 PSGKRGAFSXPXPVGXSXXXXGXXXPXWAXXPNPPVXPXPXGP-XPGXXXXXXPP 874
           P+G  G    P P G      G   P     P PP  P P GP  PG      PP
Sbjct: 549 PNGPPGPPGPPGPPGPPGPK-GPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPP 602


>AE014296-962|AAN12097.1|  268|Drosophila melanogaster CG10625-PD,
           isoform D protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
 Frame = +2

Query: 713 PSGKRGAFSXPXPVGXSXXXXGXXXPXWAXXPNPPVXPXPXGP-XPGXXXXXXPP 874
           P+G  G    P P G      G   P     P PP  P P GP  PG      PP
Sbjct: 135 PNGPPGPPGPPGPPGPPGPK-GPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPP 188


>AE014296-961|AAN12096.1|  268|Drosophila melanogaster CG10625-PA,
           isoform A protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
 Frame = +2

Query: 713 PSGKRGAFSXPXPVGXSXXXXGXXXPXWAXXPNPPVXPXPXGP-XPGXXXXXXPP 874
           P+G  G    P P G      G   P     P PP  P P GP  PG      PP
Sbjct: 135 PNGPPGPPGPPGPPGPPGPK-GPTKPGPFGPPGPPGPPGPPGPTRPGPYGPPGPP 188


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 314 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 409
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>M14645-1|AAA28987.1|  450|Drosophila melanogaster protein (
           D.melanogaster alpha-tubulin gene (alpha-3), complete
           cds. ).
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKVDPRHGKYMACCMLYR 320


>M14643-1|AAA28985.1|  450|Drosophila melanogaster protein (
           D.melanogaster alpha-tubulin gene (alpha-1), complete
           cds. ).
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKCDPRHGKYMACCMLYR 320


>BT016118-1|AAV37003.1|  450|Drosophila melanogaster LD07757p
           protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKVDPRHGKYMACCMLYR 320


>BT012506-1|AAS93777.1|  450|Drosophila melanogaster AT25469p
           protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKCDPRHGKYMACCMLYR 320


>BT003630-1|AAO39634.1|  450|Drosophila melanogaster AT26363p
           protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKVDPRHGKYMACCMLYR 320


>AY084208-1|AAL89946.1|  450|Drosophila melanogaster SD07763p
           protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKVDPRHGKYMACCMLYR 320


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 314 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 409
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


>AE014297-627|AAN13341.1|  450|Drosophila melanogaster CG2512-PB,
           isoform B protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKVDPRHGKYMACCMLYR 320


>AE014297-626|AAF54007.1|  450|Drosophila melanogaster CG2512-PA,
           isoform A protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKVDPRHGKYMACCMLYR 320


>AE014297-554|AAF54067.1|  450|Drosophila melanogaster CG1913-PA
           protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 120 SCLDPINPXLKGDPRHXXYQQSLNXYR 40
           +C +P N  +K DPRH  Y      YR
Sbjct: 294 ACFEPANQMVKCDPRHGKYMACCMLYR 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,197,131
Number of Sequences: 53049
Number of extensions: 556261
Number of successful extensions: 1520
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)