Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_C16
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29157-2|AAA68422.1| 205|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z77660-6|CAB01177.1| 197|Caenorhabditis elegans Hypothetical pr... 40 0.002
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z96048-2|CAB09420.1| 155|Caenorhabditis elegans Hypothetical pr... 32 0.61
U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical p... 31 1.1
Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical pr... 30 1.9
U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF025452-3|AAB70939.2| 198|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81035-1|CAB02735.1| 221|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 29 5.7
Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical p... 28 9.9
>U29157-2|AAA68422.1| 205|Caenorhabditis elegans Hypothetical
protein C34D10.1 protein.
Length = 205
Score = 62.5 bits (145), Expect = 4e-10
Identities = 35/115 (30%), Positives = 59/115 (51%)
Frame = +2
Query: 143 PVFVFPVSLEFYLNARHTHKQLLTVYNPYDFSVNFKVLCTSPNKFTVIDPEGVIAPQSCI 322
PVFV L+F LN + K L T+YNP+ + +K+LCT+ +TV + GV+ + C
Sbjct: 10 PVFVNTTELQFRLNEKSQAK-LFTLYNPFGHVITYKILCTATRNYTVNETTGVLQAKCCQ 68
Query: 323 DIVVRYTQPSVSHCDTIEKFRITMFDRNTQQALGKRDIPTKLIEGEPSSTNQESF 487
DIVVR Q ++K +I + + + A G + + E ++ ++ F
Sbjct: 69 DIVVRCIQR--LPVGNVDKLKIEISKKGSPTASGSCVLTLLTVSSEHTNPDEPRF 121
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 642 LLLPTQPE-QAVKSQWPDWLHIGANLKLVFSFVLGLVSMLVLRP 770
L+ PT + ++ S P LH+ KLV S++LG+VS+L+LRP
Sbjct: 161 LVCPTAGDIESKSSSVPPMLHMSFQQKLVASYILGIVSVLILRP 204
>Z77660-6|CAB01177.1| 197|Caenorhabditis elegans Hypothetical
protein F38H4.6 protein.
Length = 197
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +2
Query: 209 LTVYNPYDFSVNFKVLCTSPNKFTVIDPEGVIAPQSCIDIVVRYTQPSVSHCDTIEKFRI 388
L ++NP +V++KV CTS + F V P G + P + IV+ Y D I K
Sbjct: 104 LKLHNPMAVTVSYKVRCTSADIFRVQPPLGFVKPNETVSIVIWYQNQDKK--DAISKNHY 161
Query: 389 TMFDRNTQQALGKRDI 436
F T R++
Sbjct: 162 FAFYHTTSDGRTAREL 177
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 206 LLTVYNPYDFSVNFKVLCTSPNKFTVIDPEGVIAPQSCIDI 328
+L + NP FKV CTS + F + P G I P IDI
Sbjct: 41 VLKMTNPTTDKCAFKVKCTSNDLFKIKTPVGYIKPDETIDI 81
>Z96048-2|CAB09420.1| 155|Caenorhabditis elegans Hypothetical
protein F57A10.2 protein.
Length = 155
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +2
Query: 209 LTVYNPYDFSVNFKVLCTSPNKFTVIDPEGVIAPQSCIDIVV----RYTQPSVSH 361
L ++NP D + FKV CTS F V P I + +++V+ + QP H
Sbjct: 59 LRLHNPTDKRITFKVRCTSAELFRVQPPIAFINAGATVNLVMWSANTHLQPEKKH 113
>U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical
protein B0336.11a protein.
Length = 567
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 230 DFSVNFKVLCTSPNKFTVIDPEGVIAPQSCIDIVVRYTQPSVSHCDTIEKFRITMFDRNT 409
D + FK TSP KF V G++ P +I+ Y Q H EKF + + ++
Sbjct: 387 DTPIMFKFKTTSPEKFRVRPSSGIVQP-GTTEIIRVYLQYEYRHSWNKEKFLLLTMESSS 445
>Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical
protein C31C9.3 protein.
Length = 377
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 371 IEKFRITMFDRNTQQALGKRDIPTKLIEGEPSSTNQESFGENFHPIASRAAPIRPTED 544
+EK R+ + N + ++ T L EP N E G NFH +S ++ E+
Sbjct: 189 LEKLRLDFLEHNKEDTQCMEELLTVLENSEPHVLNIEFEGLNFHETSSVLKNLKNVEE 246
>U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical
protein K05F1.9 protein.
Length = 218
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 209 LTVYNPYDFSVNFKVLCTSPNKFTVIDPEGVIAPQSCIDIVVRYTQPS 352
L + NP FK+ CTS F + P G I P+ + I V Y P+
Sbjct: 42 LNLTNPTKDRYAFKIKCTSNQLFKIKSPVGYINPEESLTIPV-YHYPA 88
>AF025452-3|AAB70939.2| 198|Caenorhabditis elegans Hypothetical
protein B0454.5 protein.
Length = 198
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 526 WCSSGCYWMKVFTKAFLVCT*WFTFNKFGWNVSFSQSLLSISV 398
WC GCYW+ A C W+T+N + + FS L +SV
Sbjct: 147 WCIFGCYWVFGSWTARAYCD-WWTYNIATFFLFFSIFWLFMSV 188
>Z81035-1|CAB02735.1| 221|Caenorhabditis elegans Hypothetical
protein C15H11.1 protein.
Length = 221
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +2
Query: 167 LEFYLNARHTHKQLLTVYNPYDFSVNFKVLCTSPNKFTVIDPEGVIAPQSCIDIVVRY 340
++F + R K +L + N + FKV CT + F + G++ + +++ Y
Sbjct: 16 IQFLSDPREEQKTILKITNQSEMKQAFKVKCTRNDLFRIKPSTGILDYNQTLTVILVY 73
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +2
Query: 314 SCIDIVVRYTQPSVSHCDTIEKFRITMFDRNTQQA-LGKRDIPTKLIEGEPSSTNQESFG 490
SC D ++R++ + + +EK T F+ N + A G + I K I G+ +
Sbjct: 528 SCADELMRHSSVTFESSEQLEKVMKTAFEENFEIANAGPQRI--KEISGKILEVFGSTSS 585
Query: 491 ENFHP-IASRAAPIRPTEDHTK 553
E+ H IAS + PTE++ K
Sbjct: 586 ESDHDRIASSIIELIPTEEYEK 607
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 434 IPTKLIEGEPSSTNQESFGENFHPIASRAAPIRPTEDH 547
IPT + P++ + F P A++A+P PT H
Sbjct: 793 IPTVIPSTMPTTPEPPTISSTFTPAATQASPATPTPQH 830
>Z99281-46|CAB54455.3| 795|Caenorhabditis elegans Hypothetical
protein Y57G11C.32 protein.
Length = 795
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +3
Query: 303 SLHKAVLILSYVTHNHLFHIATQ*KNSE*LCLTEILSRLWEKETFQPNLLK 455
SLH+ +L++ +T+ HLF IA + ++ + E +L ++ + LLK
Sbjct: 276 SLHRVLLLMLRITYRHLFSIALRENHNNLGKIAERYKKLLGEDDGEHVLLK 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,014,745
Number of Sequences: 27780
Number of extensions: 445999
Number of successful extensions: 1119
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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