BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_C14
(1018 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.20
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 3.3
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 7.7
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 7.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 7.7
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 7.7
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 27.5 bits (58), Expect = 0.20
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 688 PXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXP 792
P P PP PS PG PP GA P P
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPP-GAPPSQNP 60
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.4 bits (48), Expect = 3.3
Identities = 15/55 (27%), Positives = 16/55 (29%), Gaps = 2/55 (3%)
Frame = +1
Query: 649 RXPPPXXRAXPGGPXAPXXPPXXXPP--PXPSXXSXPGXPPXGASPLXXPXRXPP 807
R P P R P P P P P P P P+ P PP
Sbjct: 110 RPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 164
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 40 AEPGNNRPIYIPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRPP 84
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 39 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 83
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 179 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 223
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 207 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 251
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 235 AEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRPP 279
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 40 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 84
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 68 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 112
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 96 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 140
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 7.7
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 706 PPXXXPPPXPSXXSXP 753
PP PPP P S P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 11 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 55
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 39 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 83
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 67 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 111
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 95 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 139
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 123 AEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPRPP 167
Score = 22.2 bits (45), Expect = 7.7
Identities = 12/45 (26%), Positives = 14/45 (31%)
Frame = +1
Query: 673 AXPGGPXAPXXPPXXXPPPXPSXXSXPGXPPXGASPLXXPXRXPP 807
A PG P P P + P P P+ P PP
Sbjct: 151 AEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 195
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,914
Number of Sequences: 438
Number of extensions: 4000
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33862920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -