Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_C13
(875 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55D29 Cluster: PREDICTED: similar to Exosome co... 271 1e-71
UniRef50_UPI0000DB70B0 Cluster: PREDICTED: similar to exosome co... 268 9e-71
UniRef50_UPI00015B5DF5 Cluster: PREDICTED: similar to SCL75 prot... 251 2e-65
UniRef50_Q06265 Cluster: Exosome complex exonuclease RRP45; n=40... 236 5e-61
UniRef50_UPI0000E45C6E Cluster: PREDICTED: similar to SCL75 prot... 227 4e-58
UniRef50_UPI00006610C8 Cluster: Exosome complex exonuclease RRP4... 208 1e-52
UniRef50_Q55BJ2 Cluster: Putative uncharacterized protein; n=1; ... 186 5e-46
UniRef50_Q7RZN0 Cluster: Putative uncharacterized protein NCU003... 182 1e-44
UniRef50_O74918 Cluster: Putative exosome complex exonuclease RR... 182 1e-44
UniRef50_Q8T4A9 Cluster: AT07738p; n=2; Sophophora|Rep: AT07738p... 181 2e-44
UniRef50_Q20128 Cluster: Putative uncharacterized protein; n=3; ... 175 9e-43
UniRef50_Q9M209 Cluster: Nucleolar autoantigen-like protein; n=8... 173 6e-42
UniRef50_Q5KKS4 Cluster: Exosome complex exonuclease rrp45, puta... 171 2e-41
UniRef50_Q05636 Cluster: Exosome complex exonuclease RRP45; n=9;... 169 1e-40
UniRef50_Q6CFB7 Cluster: Yarrowia lipolytica chromosome B of str... 150 4e-35
UniRef50_Q2TZL0 Cluster: Exosomal 3'-5' exoribonuclease complex;... 146 5e-34
UniRef50_Q4PFY5 Cluster: Putative uncharacterized protein; n=1; ... 138 2e-31
UniRef50_Q23PW9 Cluster: 3' exoribonuclease family, domain 1 con... 136 5e-31
UniRef50_A5K2Q0 Cluster: Exosome complex exonuclease, putative; ... 131 2e-29
UniRef50_A5DZH2 Cluster: Putative uncharacterized protein; n=1; ... 128 2e-28
UniRef50_A7AUY6 Cluster: 3' exoribonuclease family, domain 1 con... 125 1e-27
UniRef50_Q8ID62 Cluster: Exosome complex exonuclease, putative; ... 121 2e-26
UniRef50_O26778 Cluster: Probable exosome complex exonuclease 2;... 119 1e-25
UniRef50_Q4UFY0 Cluster: Exosome complex exonuclease, putative; ... 117 5e-25
UniRef50_Q4D743 Cluster: Ribosomal RNA processing protein 45, pu... 113 7e-24
UniRef50_Q59X53 Cluster: Potential exosome component Rrp45p; n=1... 110 4e-23
UniRef50_A1RXQ5 Cluster: 3' exoribonuclease; n=1; Thermofilum pe... 110 5e-23
UniRef50_A3H8A6 Cluster: 3' exoribonuclease; n=1; Caldivirga maq... 109 1e-22
UniRef50_Q8U0M0 Cluster: Probable exosome complex exonuclease 2;... 107 4e-22
UniRef50_Q4QBI9 Cluster: Exosome complex exonuclease RRP45 homol... 104 3e-21
UniRef50_Q5CYG9 Cluster: RRP45-like archaeo-eukaryotic exosomal ... 101 2e-20
UniRef50_Q64CA6 Cluster: TRNA nucleotidyltransferase; n=4; envir... 101 2e-20
UniRef50_Q8TGX5 Cluster: Probable exosome complex exonuclease 2;... 101 2e-20
UniRef50_Q2NEX4 Cluster: Putative exosome complex, exonuclease 2... 99 7e-20
UniRef50_A0D7R2 Cluster: Chromosome undetermined scaffold_40, wh... 98 3e-19
UniRef50_Q6L224 Cluster: Ribonuclease PH; n=2; Thermoplasmatales... 95 2e-18
UniRef50_UPI000049A2AB Cluster: exosome complex exonuclease; n=1... 95 2e-18
UniRef50_Q9UXC0 Cluster: Probable exosome complex exonuclease 2;... 94 4e-18
UniRef50_Q8ZVN0 Cluster: Probable exosome complex exonuclease 2;... 94 4e-18
UniRef50_UPI000051A59D Cluster: PREDICTED: similar to Exosome co... 93 6e-18
UniRef50_Q583T6 Cluster: Ribosomal RNA processing protein 45; n=... 93 8e-18
UniRef50_Q96B26 Cluster: Exosome complex exonuclease RRP43; n=37... 93 1e-17
UniRef50_Q7Q0D9 Cluster: ENSANGP00000011759; n=2; Culicidae|Rep:... 91 3e-17
UniRef50_Q9YC05 Cluster: Probable exosome complex exonuclease 2;... 91 3e-17
UniRef50_Q10205 Cluster: Putative exosome complex exonuclease RR... 87 4e-16
UniRef50_Q15024 Cluster: Exosome complex exonuclease RRP42; n=36... 82 2e-14
UniRef50_Q2QT85 Cluster: 3' exoribonuclease family, domain 1 con... 80 8e-14
UniRef50_Q5KMZ6 Cluster: Opa-interacting protein OIP2, putative;... 77 4e-13
UniRef50_A0RXU0 Cluster: RNase PH-related exoribonuclease; n=1; ... 77 4e-13
UniRef50_Q9ZUI4 Cluster: T2K10.14 protein; n=10; Magnoliophyta|R... 75 2e-12
UniRef50_Q29QQ9 Cluster: IP10364p; n=8; Endopterygota|Rep: IP103... 75 2e-12
UniRef50_Q5DA97 Cluster: SJCHGC04772 protein; n=1; Schistosoma j... 73 7e-12
UniRef50_UPI0000E49695 Cluster: PREDICTED: hypothetical protein;... 71 3e-11
UniRef50_A2DPV1 Cluster: Nucleolar autoantigen-like protein, put... 70 7e-11
UniRef50_Q4P345 Cluster: Putative uncharacterized protein; n=1; ... 70 7e-11
UniRef50_Q8SVE0 Cluster: Putative uncharacterized protein ECU06_... 68 3e-10
UniRef50_A2F1P7 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_Q5BWV4 Cluster: SJCHGC04363 protein; n=1; Schistosoma j... 64 4e-09
UniRef50_Q54CU6 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q9SSE1 Cluster: MLP3.20 protein; n=5; core eudicotyledo... 60 1e-07
UniRef50_Q4UI91 Cluster: Exosome ribonuclease PH (Rrp42 homologu... 58 2e-07
UniRef50_A7SQ50 Cluster: Predicted protein; n=1; Nematostella ve... 58 2e-07
UniRef50_Q7QP16 Cluster: GLP_83_5565_6509; n=1; Giardia lamblia ... 57 5e-07
UniRef50_UPI0000498B14 Cluster: exosome complex exonuclease; n=1... 57 7e-07
UniRef50_Q4YPT7 Cluster: Exoribonuclease PH, putative; n=5; Plas... 55 2e-06
UniRef50_A7ARR1 Cluster: Putative uncharacterized protein; n=1; ... 55 3e-06
UniRef50_Q8MPG3 Cluster: Exosome-associated protein 2; n=3; Tryp... 46 0.002
UniRef50_O45424 Cluster: Putative uncharacterized protein exos-7... 43 0.009
UniRef50_Q5CZ14 Cluster: RPR45-like archaeo-eukaryotic exosomal ... 42 0.021
UniRef50_Q4Q1B7 Cluster: Exosome complex exonuclease RRP41, puta... 39 0.14
UniRef50_A0RXU1 Cluster: RNase PH; n=1; Cenarchaeum symbiosum|Re... 39 0.19
UniRef50_UPI0000E4A2CF Cluster: PREDICTED: similar to Exosc7 pro... 38 0.25
UniRef50_A3FQP8 Cluster: Exoribonuclease PH, putative; n=2; Cryp... 38 0.25
UniRef50_Q01CP9 Cluster: Exosc8 protein; n=2; Ostreococcus|Rep: ... 38 0.44
UniRef50_Q54VM4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.44
UniRef50_Q7QPU9 Cluster: GLP_16_6871_9435; n=1; Giardia lamblia ... 37 0.77
UniRef50_A6NT19 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_A2FQU8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_Q00YJ4 Cluster: Exosomal 3'-5' exoribonuclease complex,... 35 3.1
UniRef50_A5KBP5 Cluster: Putative uncharacterized protein; n=3; ... 35 3.1
UniRef50_O96177 Cluster: Putative uncharacterized protein PFB041... 34 5.5
UniRef50_UPI00006A0892 Cluster: Hook-related protein 1; n=1; Xen... 33 7.2
UniRef50_A5TWD5 Cluster: Possible replication protein; n=1; Fuso... 33 7.2
UniRef50_Q9SP08 Cluster: Exonuclease RRP41; n=5; Magnoliophyta|R... 33 7.2
UniRef50_Q9UNA0 Cluster: ADAMTS-5 precursor; n=20; Euteleostomi|... 33 7.2
UniRef50_Q6F498 Cluster: Putative transcriptional regulator, sim... 33 9.5
UniRef50_Q95QG7 Cluster: Putative uncharacterized protein; n=2; ... 33 9.5
UniRef50_Q24GF7 Cluster: 3' exoribonuclease family, domain 1 con... 33 9.5
UniRef50_Q6L223 Cluster: Ribonuclease PH; n=2; Thermoplasmatales... 33 9.5
>UniRef50_UPI0000D55D29 Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP45 (Exosome component 9)
(Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome associated a...; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Exosome complex exonuclease RRP45
(Exosome component 9) (Polymyositis/scleroderma
autoantigen 1) (Autoantigen PM/Scl 1)
(Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome associated a... - Tribolium castaneum
Length = 389
Score = 271 bits (665), Expect = 1e-71
Identities = 117/213 (54%), Positives = 165/213 (77%), Gaps = 1/213 (0%)
Frame = +2
Query: 98 ITKCVXTCXSNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILS 277
++K T +NC + F+ K +S+ RLDGR+F+E R L++ FG ++G C VSLG TK+L+
Sbjct: 1 MSKVRETLITNCERKFLMKCLSEWRRLDGRSFDEFRPLELKFGKQWGSCYVSLGNTKVLA 60
Query: 278 EVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCID 457
+ +CE+ QPK RP+EGI+ IN+ELNP+AAP FEA RQ++L+V L RLLEKC KDSK +D
Sbjct: 61 QTSCEIQQPKSSRPSEGILNINIELNPLAAPHFEAGRQSELSVQLNRLLEKCVKDSKAVD 120
Query: 458 LESLCIVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTL 637
LESLCI KVW+L+++I VLNH+GN+ +CASIA LAS+ HFRRPD T DG+ IIH+
Sbjct: 121 LESLCIKTNEKVWALKVDINVLNHEGNILDCASIAMLASLTHFRRPDVTCDGEEFIIHSY 180
Query: 638 TEKDPIPPVLYHYPVCTTFALYS-NDILLSDPN 733
++DPIP V++HYPVC T+A+++ + +L+DP+
Sbjct: 181 QQRDPIPTVIHHYPVCITYAIFNGGEYILADPS 213
>UniRef50_UPI0000DB70B0 Cluster: PREDICTED: similar to exosome
component 9; n=1; Apis mellifera|Rep: PREDICTED: similar
to exosome component 9 - Apis mellifera
Length = 396
Score = 268 bits (658), Expect = 9e-71
Identities = 112/202 (55%), Positives = 157/202 (77%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 304
SNC K+F+ K V QG RLDGR+ E R + I F S +G C+V LG+T+++++VTC++ QP
Sbjct: 7 SNCEKNFVNKSVEQGIRLDGRSLLEARPVKIYFASNWGSCMVLLGQTRVIAQVTCDIQQP 66
Query: 305 KQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVE 484
K RPNEG++ INVELNPMAA F++ RQ+++++ + R LEKCY+DSKCIDLESLCI+ +
Sbjct: 67 KTSRPNEGMLHINVELNPMAAQHFDSGRQSEISILISRQLEKCYQDSKCIDLESLCIIAD 126
Query: 485 XKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPV 664
KVW+LR++I V+NHDGNL +CASIATLA+++HF RPD T +G+ +I+H +EKDP+P
Sbjct: 127 KKVWNLRVDINVINHDGNLIDCASIATLAALSHFHRPDVTSNGEDIIVHPFSEKDPLPLT 186
Query: 665 LYHYPVCTTFALYSNDILLSDP 730
LYHYPVC +F + + + DP
Sbjct: 187 LYHYPVCVSFITFESGNTVMDP 208
>UniRef50_UPI00015B5DF5 Cluster: PREDICTED: similar to SCL75
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to SCL75 protein - Nasonia vitripennis
Length = 412
Score = 251 bits (615), Expect = 2e-65
Identities = 105/206 (50%), Positives = 149/206 (72%)
Frame = +2
Query: 116 TCXSNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEV 295
T S C K+F+ K + R+DGR E R L I+FG+ +GCC+VSLG+T+ ++V+C++
Sbjct: 4 TFISICEKNFVNKAIQTDTRIDGRTLLEPRPLKINFGTNWGCCVVSLGQTRAAAQVSCDI 63
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
QPK RPNEG++ +NVELNP+AA FE+ RQ++ + R LEK K+S+C+DLESLCI
Sbjct: 64 QQPKASRPNEGMLHVNVELNPLAAQHFESGRQSEAAALINRQLEKSLKESRCVDLESLCI 123
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPI 655
V + KVW++R+++ ++NHDGNL +CASIA LA++ HF RPD T G+ VIIH TEKDP+
Sbjct: 124 VADKKVWNIRVDVSIINHDGNLIDCASIAALAALMHFHRPDVTSTGEEVIIHPFTEKDPL 183
Query: 656 PPVLYHYPVCTTFALYSNDILLSDPN 733
P LYH+PVC +F + N + DP+
Sbjct: 184 PLTLYHHPVCISFITFENGKTVVDPS 209
>UniRef50_Q06265 Cluster: Exosome complex exonuclease RRP45; n=40;
Eumetazoa|Rep: Exosome complex exonuclease RRP45 - Homo
sapiens (Human)
Length = 439
Score = 236 bits (578), Expect = 5e-61
Identities = 102/207 (49%), Positives = 146/207 (70%), Gaps = 1/207 (0%)
Frame = +2
Query: 116 TCXSNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEV 295
T SNC + F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+CE+
Sbjct: 4 TPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCEL 63
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+
Sbjct: 64 VSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCV 123
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPI 655
V KVW +R+++ +LNHDGN+ + ASIA + ++ HFRRPD + GD V ++T E+DP+
Sbjct: 124 VAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPV 183
Query: 656 PPVLYHYPVCTTFALY-SNDILLSDPN 733
P ++H P+C +FA + LL DPN
Sbjct: 184 PLSIHHMPICVSFAFFQQGTYLLVDPN 210
>UniRef50_UPI0000E45C6E Cluster: PREDICTED: similar to SCL75
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to SCL75 protein - Strongylocentrotus
purpuratus
Length = 437
Score = 227 bits (554), Expect = 4e-58
Identities = 103/215 (47%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
Frame = +2
Query: 116 TCXSNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEV 295
T SN + FI K + + RLDGR + R+ I FG E GCC+V +G+T+IL++V+CEV
Sbjct: 2 TALSNLEEDFILKAIEESKRLDGRQPYDYRRTKIEFGVERGCCMVHMGDTRILAQVSCEV 61
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
+PK+ RPNEG +F+N+EL+PMA+ FEA R +D + L RLLE+ KDS+ +D+ESLCI
Sbjct: 62 VEPKENRPNEGQLFVNLELSPMASTTFEAGRLSDYGIELNRLLERTVKDSRAVDVESLCI 121
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPI 655
V KVW +R+++ VLNHDGN+ + A +A LA+++HFRRPD T G+ V IH+ ++DP+
Sbjct: 122 VAGEKVWKIRLDVHVLNHDGNILDSACLAALAALSHFRRPDVTVIGESVTIHSPQDRDPV 181
Query: 656 PPVLYHYPVCTTFALY-SNDILLSDPNSWKNQCVQ 757
P ++H PVC TFA Y LL DP + + ++
Sbjct: 182 PLNVHHIPVCVTFAFYHKGKRLLVDPTEKEEKVME 216
>UniRef50_UPI00006610C8 Cluster: Exosome complex exonuclease RRP45
(EC 3.1.13.-) (Exosome component 9)
(Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome-associated autoa; n=1; Takifugu rubripes|Rep:
Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome
component 9) (Polymyositis/scleroderma autoantigen 1)
(Autoantigen PM/Scl 1) (Polymyositis/scleroderma
autoantigen 75 kDa) (PM/Scl-75) (P75
polymyositis-scleroderma overlap syndrome-associated
autoa - Takifugu rubripes
Length = 336
Score = 208 bits (509), Expect = 1e-52
Identities = 86/171 (50%), Positives = 130/171 (76%)
Frame = +2
Query: 116 TCXSNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEV 295
T SN + F+ K +++ RLDGR + R++ +SFG++YGCC V LGET+++++V+CE+
Sbjct: 4 TPLSNSERDFLLKAIAEKKRLDGRQTYDYRRIKVSFGADYGCCFVELGETRVMAQVSCEL 63
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
PK+ RPNEGI+F N+EL+PMA+P FEA RQ++L+V L R LE+C ++SKCID ESLC+
Sbjct: 64 VAPKESRPNEGILFFNIELSPMASPAFEAGRQSELSVKLNRQLERCLRNSKCIDTESLCV 123
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVII 628
V KVW +R+++ +LNHDGNL + ASIA + +++HFRRPD + G+ + +
Sbjct: 124 VSGEKVWQIRVDVHLLNHDGNLMDAASIAAITALSHFRRPDVSSVGEEITV 174
>UniRef50_Q55BJ2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 526
Score = 186 bits (454), Expect = 5e-46
Identities = 79/200 (39%), Positives = 128/200 (64%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIR 316
K F+ + + R+DGR N+ R + I FG YG V LG+T++ + +TC++ +PK R
Sbjct: 10 KDFVLSSIEKLQRIDGRGVNDMRAIKIEFGKSYGVVEVQLGKTRVFTAITCDIVEPKPER 69
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
PNEG N +++PM++ N+ + L R++EK KDS+ ID E+LCI+ KVW
Sbjct: 70 PNEGFYIFNTDISPMSSVSVNVNQPNPMESELGRIIEKGLKDSRAIDTEALCIISGSKVW 129
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHY 676
S++I I VL+ GNL +CASI+ + ++ HFR+PD T G+ IH+L E++P+P ++H
Sbjct: 130 SIKIAIHVLDDCGNLLDCASISVMTALIHFRKPDVTVIGNDATIHSLDEREPVPLSIHHT 189
Query: 677 PVCTTFALYSNDILLSDPNS 736
P+ TF + N+I++ DP++
Sbjct: 190 PISITFGFFPNEIMIVDPDT 209
>UniRef50_Q7RZN0 Cluster: Putative uncharacterized protein
NCU00334.1; n=7; Pezizomycotina|Rep: Putative
uncharacterized protein NCU00334.1 - Neurospora crassa
Length = 297
Score = 182 bits (443), Expect = 1e-44
Identities = 87/193 (45%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Frame = +2
Query: 137 KHFIQK-LVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQI 313
K F+ K L + RLDGR F++ R L+++FG EYG VSLG+TKIL++ + EV P
Sbjct: 12 KAFLLKALQDEQIRLDGREFDQYRPLELTFGDEYGVANVSLGKTKILAKASAEVTVPFAD 71
Query: 314 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKV 493
RP +GI I EL+PMAAP FE NR T+ V L RLLEK + S +D ESLC+V K
Sbjct: 72 RPLDGIFTIATELSPMAAPHFEVNRPTETEVLLSRLLEKTVRRSGALDTESLCLVAGQKC 131
Query: 494 WSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYH 673
WS+R+++ VL+HDGNLT+ A A +A++ HFR+PD + + + ++T E++P+P H
Sbjct: 132 WSVRVDVHVLSHDGNLTDAACFAVVAALRHFRKPDTSMENGVLTVYTPAEREPVPLGWLH 191
Query: 674 YPVCTTFALYSND 712
P C T++ + +
Sbjct: 192 SPFCVTWSFFGEE 204
>UniRef50_O74918 Cluster: Putative exosome complex exonuclease
RRP45; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP45 - Schizosaccharomyces
pombe (Fission yeast)
Length = 291
Score = 182 bits (443), Expect = 1e-44
Identities = 79/191 (41%), Positives = 120/191 (62%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIR 316
K F+ + +G RLDGR ++ R L+I FG EYG VS G T++++ +T E+ +P R
Sbjct: 12 KEFVLNSLEKGLRLDGRQLSDFRSLEIQFGKEYGQVDVSFGHTRVMARITTEITKPYTDR 71
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
P +GI I EL P+A FEA R +D + + RL+EK + S +D ESLCI+ K W
Sbjct: 72 PFDGIFSITTELTPLAYSAFEAGRVSDQEIVISRLIEKAVRRSNALDTESLCIISGQKCW 131
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHY 676
+R ++ +NHDGNL + A IA +A++ HFRRP+ T G+ V +H + E+ P+P + H
Sbjct: 132 HVRASVHFINHDGNLVDAACIAVIAALCHFRRPELTVVGEEVTVHPVEERVPVPLSILHM 191
Query: 677 PVCTTFALYSN 709
P+C TF+ ++N
Sbjct: 192 PICVTFSFFNN 202
>UniRef50_Q8T4A9 Cluster: AT07738p; n=2; Sophophora|Rep: AT07738p -
Drosophila melanogaster (Fruit fly)
Length = 412
Score = 181 bits (440), Expect = 2e-44
Identities = 85/194 (43%), Positives = 129/194 (66%), Gaps = 1/194 (0%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIR 316
+ F+Q V Q RLDGR NE+R ++++FG ++G VS+G+TK+L++VTCE+ P R
Sbjct: 17 RSFVQLAVKQNQRLDGRRSNESRDVELTFGKDWGSVAVSMGDTKVLAQVTCEMGPPALSR 76
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
PNEG I +NV L +A ++ L LLE+ ++ S+ IDLESLC+ VE VW
Sbjct: 77 PNEGKIHLNVYLGGVAFLDEAHTTHDQRSLKLNSLLERTFRSSRSIDLESLCVAVEKHVW 136
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPD-FTRDGDRVIIHTLTEKDPIPPVLYH 673
+R+N+ VLNHDGNL + ++IATLA++ HFRRPD + +DG+ + I E++ IP + +H
Sbjct: 137 CIRVNVNVLNHDGNLYDASTIATLAALMHFRRPDVWYKDGE-LRIFKKKEREFIPLLFHH 195
Query: 674 YPVCTTFALYSNDI 715
YPV T+ +Y + +
Sbjct: 196 YPVSVTYCVYKSSV 209
>UniRef50_Q20128 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 434
Score = 175 bits (427), Expect = 9e-43
Identities = 78/211 (36%), Positives = 134/211 (63%), Gaps = 1/211 (0%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 304
+NC K I + + G R D R+ E R + + G+E G I ++G TK+++ V+ E+A+P
Sbjct: 7 TNCEKAVILEALKIGKRFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVSAEIAEP 66
Query: 305 KQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVE 484
+RP++G+I I+V+L+PMA E +R + L+RLLE +DS+CID+E+LCI
Sbjct: 67 SSMRPHKGVINIDVDLSPMANYANEHDRLGSKGMELIRLLELIIRDSRCIDVEALCIRAG 126
Query: 485 XKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPV 664
++W +R+++++L+ DG+L +CA +A + ++ HFRRP+ T + +I++ EK P+P
Sbjct: 127 KEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEKAPVPLN 186
Query: 665 LYHYPVCTTFALY-SNDILLSDPNSWKNQCV 754
+YH P+CTT L I++ DP + C+
Sbjct: 187 IYHMPICTTIGLLDKGQIVVIDPTDKETACL 217
>UniRef50_Q9M209 Cluster: Nucleolar autoantigen-like protein; n=8;
Magnoliophyta|Rep: Nucleolar autoantigen-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 438
Score = 173 bits (420), Expect = 6e-42
Identities = 81/200 (40%), Positives = 128/200 (64%), Gaps = 4/200 (2%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPN 322
F++ + R+DGR + RKL I FG EYG V LG+T ++ VT ++ QP + RPN
Sbjct: 18 FVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHVMGFVTAQLVQPYKDRPN 77
Query: 323 EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSL 502
EG + I E +PMA P FE R + V L R++++ ++S+ +D ESLC++ VWS+
Sbjct: 78 EGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRAVDTESLCVLAGKMVWSV 137
Query: 503 RINIKVLNHDGNLTECASIATLASIAHFRRPDFT---RDGDRVIIHTLTEKDPIPPVLYH 673
RI++ +L++ GNL + A+IA LA++ FRRPD T +G VIIH L E++P+P +++H
Sbjct: 138 RIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEVIIHPLEEREPLPLIIHH 197
Query: 674 YPVCTTFALYS-NDILLSDP 730
P+ TF ++ +I++ DP
Sbjct: 198 LPIAFTFGFFNKGNIVVMDP 217
>UniRef50_Q5KKS4 Cluster: Exosome complex exonuclease rrp45,
putative; n=1; Filobasidiella neoformans|Rep: Exosome
complex exonuclease rrp45, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 281
Score = 171 bits (416), Expect = 2e-41
Identities = 81/197 (41%), Positives = 123/197 (62%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPN 322
F+ +++G RLDGR + R + FG E GC LG+T IL++V+ + +P+ RP
Sbjct: 14 FLLAALAEGKRLDGRLPLQMRDVHYIFGDELGCVECRLGKTAILAQVSATIVKPRDDRPY 73
Query: 323 EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSL 502
EG + IN E+ PMA+ +E R D V + RLLEK + ++ ID E+LCI+ KVW L
Sbjct: 74 EGFLLINSEIGPMASSVYENGRPGDDEVMIGRLLEKSIRRTEAIDREALCILAGEKVWQL 133
Query: 503 RINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYPV 682
R+ + L+ GNL +CA++A +A++ HFR+PD GD VIIH+ E+ P+P ++H P+
Sbjct: 134 RLTLHFLSDSGNLLDCAALAGMAALKHFRKPDVEVIGDEVIIHSPEERAPVPLAIHHTPL 193
Query: 683 CTTFALYSNDILLSDPN 733
C TFA + N + DP+
Sbjct: 194 CLTFAYFENLPPILDPS 210
>UniRef50_Q05636 Cluster: Exosome complex exonuclease RRP45; n=9;
Saccharomycetales|Rep: Exosome complex exonuclease RRP45
- Saccharomyces cerevisiae (Baker's yeast)
Length = 305
Score = 169 bits (410), Expect = 1e-40
Identities = 72/189 (38%), Positives = 123/189 (65%), Gaps = 1/189 (0%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPN 322
FI + + Q +RLDGR+F++ R ++I+FG E+G V +G TK+ ++C++AQP + RP
Sbjct: 14 FILEALRQNYRLDGRSFDQFRDVEITFGKEFGDVSVKMGNTKVHCRISCQIAQPYEDRPF 73
Query: 323 EGIIFINVELNPMAAPQFEANRQT-DLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWS 499
EG+ I+ E++PMA QFE T + V R++EK + S +D+E LCIV K W+
Sbjct: 74 EGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIEKSVRRSGALDVEGLCIVAGSKCWA 133
Query: 500 LRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYP 679
+R ++ L+ DG + + IA +A + HF++PD T G+++I+H + E++P+P + H P
Sbjct: 134 VRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITVHGEQIIVHPVNEREPVPLGILHIP 193
Query: 680 VCTTFALYS 706
+C TF+ ++
Sbjct: 194 ICVTFSFFN 202
>UniRef50_Q6CFB7 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 299
Score = 150 bits (364), Expect = 4e-35
Identities = 63/189 (33%), Positives = 115/189 (60%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIR 316
+ F+ + + RLDGR+ E R ++++FGS++G +++G+TK++ ++ E+ +P + R
Sbjct: 7 RKFLTEALKVSKRLDGRSMEEQRPMEVTFGSQFGHVELTMGKTKVVVRISAEITKPNERR 66
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
P EGI ++ ++ MA+P FE N Q++ + + +++EK + S +DLESLCIV K W
Sbjct: 67 PFEGIFVVHTDIGSMASPIFENNHQSEQEIMISQVVEKAVRRSGALDLESLCIVAGKKCW 126
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHY 676
+R ++ L+ DG L + A +A + HF++PD DG V + + E+ P+ + H
Sbjct: 127 EIRADVHYLDFDGGLVDATCAAVMAGLYHFKKPDVDVDGGAVTVCDMEERHPVALSVLHL 186
Query: 677 PVCTTFALY 703
PV T+ L+
Sbjct: 187 PVSVTYGLF 195
>UniRef50_Q2TZL0 Cluster: Exosomal 3'-5' exoribonuclease complex;
n=8; Eurotiomycetidae|Rep: Exosomal 3'-5'
exoribonuclease complex - Aspergillus oryzae
Length = 292
Score = 146 bits (355), Expect = 5e-34
Identities = 68/186 (36%), Positives = 110/186 (59%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIR 316
+ FI + + RLDGR ++ R L++SFG EYG V LG+T ++ ++ EV +P R
Sbjct: 12 RDFILNALREDVRLDGRQADQFRPLNVSFGEEYGHVKVQLGKTSLIVRISSEVTKPHDDR 71
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
P +GI I +EL M +P +E RQ DL Y+ +L++ + S +D ESLC++ W
Sbjct: 72 PFDGIFTIALELTAMGSPAWENGRQGDLETYVSNVLDRVIRHSNALDTESLCVLKGVSCW 131
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHY 676
++R ++ + N+DGNL + A I +A + HFRRPD +VI++ + E+ P+ + H
Sbjct: 132 NVRADVHITNYDGNLIDAACIGVMAGLQHFRRPDAVVKDGQVIVYGVDERVPVALNITHK 191
Query: 677 PVCTTF 694
P+ TF
Sbjct: 192 PLSVTF 197
>UniRef50_Q4PFY5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 327
Score = 138 bits (333), Expect = 2e-31
Identities = 66/202 (32%), Positives = 121/202 (59%), Gaps = 7/202 (3%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 304
S F+ +S G R DGR+F TR +DISFG E G C V++ T++ + V + P
Sbjct: 10 SETESDFVVSCLSDGVRPDGRSFLSTRDVDISFGEELGNCTVAIKGTRVSTCVRATLMPP 69
Query: 305 KQIRPNEGIIFINVELNPMAAPQFE-----ANRQTDL-TVYLVRLLEKCYKDSKCIDLES 466
+ RP EG + I +++PMA +++ AN V RL++K + ++ +D E+
Sbjct: 70 RSDRPYEGFLQITTDISPMAGIEYDSTGGGANSSARAREVLFDRLIDKAVRRTEAVDREA 129
Query: 467 LCIVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFT-RDGDRVIIHTLTE 643
LC+V +VW++ + + +L+ G + A + ++ S+ HFRRPD++ +G++V +++L E
Sbjct: 130 LCVVAGEQVWNVHLTVHLLSDTGAALDAAVLCSMLSLRHFRRPDYSIENGNQVRLYSLDE 189
Query: 644 KDPIPPVLYHYPVCTTFALYSN 709
+ P+P ++H P+C TFA++++
Sbjct: 190 RVPVPLAIHHTPLCVTFAIFNH 211
>UniRef50_Q23PW9 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: 3' exoribonuclease family, domain 1 containing
protein - Tetrahymena thermophila SB210
Length = 776
Score = 136 bits (330), Expect = 5e-31
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 3/198 (1%)
Frame = +2
Query: 173 RLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINVEL 352
RLDGR ++R + + FG+ G V +G+T I+++ T E+ QPKQ +PNEG + NV+L
Sbjct: 466 RLDGRKLMDSRNIKVIFGNNVGEIEVLIGDTHIITKTTAEIIQPKQEKPNEGSLKFNVDL 525
Query: 353 NPMAAPQFEANRQTD-LTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVLNH 529
+ M Q N + + +LLEK K SK ID+ESLCIV +VWS+ ++ V+++
Sbjct: 526 SSMQDEQQPNNVNIKKYSNEIQKLLEKIIKGSKAIDMESLCIVTNKRVWSINVDSSVVSN 585
Query: 530 DGNLTECASIATLASIAHFRRPDFT-RDGDRVIIHTLTEKDPIPPVLYHYPVCTTFALY- 703
GNL + ++ + S+ HFR+P + + IH TEK+P P ++H P+ TFA +
Sbjct: 586 GGNLIDAIYLSVIISLLHFRKPYVSVEQQSNIKIH--TEKNPQPLSIHHIPIPFTFAFFK 643
Query: 704 SNDILLSDPNSWKNQCVQ 757
+ +L+SDP + Q ++
Sbjct: 644 KSTLLVSDPLVLEEQIME 661
>UniRef50_A5K2Q0 Cluster: Exosome complex exonuclease, putative;
n=4; Plasmodium|Rep: Exosome complex exonuclease,
putative - Plasmodium vivax
Length = 518
Score = 131 bits (317), Expect = 2e-29
Identities = 67/188 (35%), Positives = 112/188 (59%), Gaps = 1/188 (0%)
Frame = +2
Query: 173 RLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINVEL 352
RLDGR F ++R + I F E+G VS+G TK++ ++T E+ +P RPNEGII +N+++
Sbjct: 20 RLDGRKFEDSRNISIYFLGEHGNVEVSIGHTKVICKITSEIVKPFDKRPNEGIIKVNLDI 79
Query: 353 NPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVLNHD 532
+ + ++ +D + + L+E+ K S ++LESLCI+ KVW L +NI V+ +D
Sbjct: 80 DSFTNVN-DNSQISDECLEIKNLIERILKSSNLLNLESLCIIPHKKVWCLLVNIIVIEND 138
Query: 533 GNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYPVCTTFALYS-N 709
GNL + ++ + + H+R + T D II E + P +++ P+ TTFA ++
Sbjct: 139 GNLYDSCYLSAYSGLVHYRNNEVTVDSSGNIIIEEGETNYTPLSIHNTPILTTFAYFNCE 198
Query: 710 DILLSDPN 733
DI L DP+
Sbjct: 199 DICLIDPS 206
>UniRef50_A5DZH2 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 341
Score = 128 bits (309), Expect = 2e-28
Identities = 65/203 (32%), Positives = 113/203 (55%), Gaps = 13/203 (6%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFG-SEYGCCIVSLGETKILSEVTCEVAQPKQI 313
KHF+ + RL+GR+ + R + I +EYG VS G TK+ ++ + +P +
Sbjct: 12 KHFLHTALKSQLRLNGRSLMQLRDISIYLSPTEYGYVEVSFGSTKLSVRISASITKPYED 71
Query: 314 RPNEGIIFINVELNPMAAPQFEANR-QTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXK 490
RP EGI IN E++PMA+ +F+ R Q V + R++EK + S +DLE+LCI+ +
Sbjct: 72 RPFEGIFVINSEISPMASLKFDTTRSQQQDEVLISRIIEKSIRRSNALDLENLCIIAGEQ 131
Query: 491 VWSLRINIKVLNHDGNLTECASIATLASIAHFRRPD--FTRDG---------DRVIIHTL 637
W + ++ N+DG + + AT+ +++HF++PD T G + VIIH +
Sbjct: 132 CWEITADLNFWNYDGGMIDIGCFATMLALSHFKKPDVSITHGGFGGSGNGGVNGVIIHDV 191
Query: 638 TEKDPIPPVLYHYPVCTTFALYS 706
E+ P+ + H P+C T++ ++
Sbjct: 192 NERQPVGLSILHIPICLTYSFFN 214
>UniRef50_A7AUY6 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Babesia bovis|Rep: 3'
exoribonuclease family, domain 1 containing protein -
Babesia bovis
Length = 196
Score = 125 bits (302), Expect = 1e-27
Identities = 61/150 (40%), Positives = 90/150 (60%)
Frame = +2
Query: 167 GHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINV 346
G RLDGR + RK+ + + G IVSLG+T + V+ E+ P P EGI+ +V
Sbjct: 32 GKRLDGRTSIQPRKIHVEQLANPGNVIVSLGDTIVFVAVSSEIVPPNVEHPTEGIVTFSV 91
Query: 347 ELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVLN 526
EL+PM + +E + +D+ + +EK YKDS ID+ESLCIV VW LR+NI +L
Sbjct: 92 ELSPMCSLNYEPGKASDVEQEISYAIEKIYKDSGIIDVESLCIVSRKHVWCLRVNIHILQ 151
Query: 527 HDGNLTECASIATLASIAHFRRPDFTRDGD 616
+DGNL + +IA ++ +R+PD +GD
Sbjct: 152 NDGNLLDATNIAVFKALMSYRKPDTQLNGD 181
>UniRef50_Q8ID62 Cluster: Exosome complex exonuclease, putative;
n=1; Plasmodium falciparum 3D7|Rep: Exosome complex
exonuclease, putative - Plasmodium falciparum (isolate
3D7)
Length = 477
Score = 121 bits (292), Expect = 2e-26
Identities = 66/205 (32%), Positives = 115/205 (56%), Gaps = 3/205 (1%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 304
+N HF K + + RLDGR F ++R + I+F +YG +S+G TK++ ++T E+ +P
Sbjct: 5 NNNVNHF-WKNIKKNIRLDGRTFEDSRNVCINFLKDYGHVEISIGFTKVICKITSEIVKP 63
Query: 305 KQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVE 484
+ EGI+ IN++++ ++ +D + + ++++ K S I+ ESLCI+
Sbjct: 64 HDRKLKEGILKINLDIDNFIEDNENSDNMSDECLEIKNIIDRVLKTSNIINFESLCIIPG 123
Query: 485 XKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPD--FTRDGDRVIIHTLTEKDPIP 658
KVW + INI V+ +DGNLT+ ++ + HF+ ++GD II E + P
Sbjct: 124 KKVWCICINIMVIENDGNLTDACYLSAYCGLVHFKNHQVRVIKNGD--IIIDKEEINYSP 181
Query: 659 PVLYHYPVCTTFALY-SNDILLSDP 730
+ + P+ TTFA Y +D+ L DP
Sbjct: 182 LSILNSPIVTTFAYYEEHDVCLIDP 206
>UniRef50_O26778 Cluster: Probable exosome complex exonuclease 2;
n=2; Methanobacteriaceae|Rep: Probable exosome complex
exonuclease 2 - Methanobacterium thermoautotrophicum
Length = 271
Score = 119 bits (286), Expect = 1e-25
Identities = 68/199 (34%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Frame = +2
Query: 146 IQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIR 316
I L++ R+DGR+ +E R + I G G V LG T+I+ V ++ +P
Sbjct: 16 ITDLINNKERIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFPDT 75
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
P G+I N EL PMA+P FE + +V L R++++C ++S+ IDLE LCI+ KVW
Sbjct: 76 PEMGVILTNSELLPMASPTFEPGPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVW 135
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHY 676
L +++ ++++DGNL + A +AT+A++ R P + V+I+ + P+P +
Sbjct: 136 MLFLDLHIIDYDGNLFDAAVLATVAALLDTRIPAAEVEDGEVVINR-EKMQPLP--VNRK 192
Query: 677 PVCTTFALYSNDILLSDPN 733
+ TFA N+I+L DP+
Sbjct: 193 ALMCTFAKIGNEIVL-DPS 210
>UniRef50_Q4UFY0 Cluster: Exosome complex exonuclease, putative;
n=2; Theileria|Rep: Exosome complex exonuclease,
putative - Theileria annulata
Length = 322
Score = 117 bits (281), Expect = 5e-25
Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 2/198 (1%)
Frame = +2
Query: 149 QKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEG 328
Q + G R+DGR+ + + + F G ++S G T I + V+ E+ +P RPNEG
Sbjct: 25 QDCLKNGLRIDGRSLDSYLYVSVDFDGPPGNSLISFGNTVIFTCVSQEIVEPNSERPNEG 84
Query: 329 IIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRI 508
+F NVE + + +E + TD L+ LE +K+S C+DLE+LCI +V +LR+
Sbjct: 85 FLFFNVETS-FTSECYEPGKTTDQEHNLIYFLENMFKESSCLDLETLCITSGKQVLALRV 143
Query: 509 NIKVLNHDGNLTECASIATLASIAHFRRPDF-TRDGDRVIIHTLTEKDPIPPVLYHYPV- 682
+ VL DGNL S + LAS+ H+R+P D + L K P +YH P+
Sbjct: 144 YVHVLQDDGNLLSACSFSALASLLHYRKPLMELSDELNYSFYGLWHKG-TPLNIYHVPIL 202
Query: 683 CTTFALYSNDILLSDPNS 736
T + L + D D NS
Sbjct: 203 VTVWLLETRDHSFLDHNS 220
>UniRef50_Q4D743 Cluster: Ribosomal RNA processing protein 45,
putative; n=2; Trypanosoma cruzi|Rep: Ribosomal RNA
processing protein 45, putative - Trypanosoma cruzi
Length = 334
Score = 113 bits (271), Expect = 7e-24
Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 3/181 (1%)
Frame = +2
Query: 167 GHRLDGRNFNETRKLDISF---GSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIF 337
G R D R + R++++ F + C V G T + + + CE+ +P RP GII
Sbjct: 31 GLRPDQRGAQQLREVNVDFPLLSRDVSC--VRCGGTIVTAAIACELVEPFPYRPKHGIID 88
Query: 338 INVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIK 517
+V P + +++ +T L LE+ K +D E LC++ +VWS+ +++
Sbjct: 89 FSVR-QPYT--ERDSSAKTAELKKLTAFLERLIKGGGVVDTEGLCVLPGRRVWSISVDVT 145
Query: 518 VLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYPVCTTFA 697
VLN +GN+T+ A AT+A + H+RRP+ T GD VI+H E+DP+P ++H P+ +FA
Sbjct: 146 VLNDEGNVTDVAVWATVAVLLHYRRPELTIRGDSVILHPTHERDPVPLSIHHTPLSFSFA 205
Query: 698 L 700
+
Sbjct: 206 I 206
>UniRef50_Q59X53 Cluster: Potential exosome component Rrp45p; n=1;
Candida albicans|Rep: Potential exosome component Rrp45p
- Candida albicans (Yeast)
Length = 337
Score = 110 bits (265), Expect = 4e-23
Identities = 66/195 (33%), Positives = 107/195 (54%), Gaps = 21/195 (10%)
Frame = +2
Query: 185 RNFNETRKLDISFGS-EYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINVEL-NP 358
R FN+ R +DI + YG +SLG+TK++ +T + +P Q RP EGI+ IN E+ N
Sbjct: 33 RKFNQFRPIDIKLSNTRYGSVELSLGKTKVMVNITSRITEPYQDRPFEGIMTINCEIPNH 92
Query: 359 MAAPQFEA----NRQTDLTVYLV-RLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVL 523
+ + N D + L+ R L++ + S +DLE+LCI+ KVW L I+++VL
Sbjct: 93 IKLQSNDTTNNNNDNEDEFINLINRALDRAIRRSNAVDLENLCIIAGEKVWELIIDLQVL 152
Query: 524 NHDGNLTECASIATLASIAHFRRPDFTRD-------------GDRVIIHTLTEKDP-IPP 661
N+DGNL + +A + ++ F++PD T + G +I+H K P I
Sbjct: 153 NYDGNLIDSGCLAIITALLDFKKPDVTINNNNTSNSSSTSGGGGNIIVHDDEMKRPFIEL 212
Query: 662 VLYHYPVCTTFALYS 706
+ H P+C TF+L++
Sbjct: 213 SILHIPICLTFSLFN 227
>UniRef50_A1RXQ5 Cluster: 3' exoribonuclease; n=1; Thermofilum
pendens Hrk 5|Rep: 3' exoribonuclease - Thermofilum
pendens (strain Hrk 5)
Length = 272
Score = 110 bits (264), Expect = 5e-23
Identities = 57/177 (32%), Positives = 100/177 (56%), Gaps = 3/177 (1%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEVAQPK 307
K I +++G RLDGR ++ R++ + G G V LG T++++ V + P
Sbjct: 13 KEVILASLAKGERLDGRKADQYREIRLEKGIIGKADGSARVFLGSTQVIAGVKLAIGTPF 72
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEX 487
PNEG+ +N EL+P+A+P FE + + L R++++ ++ +K +DL L I+
Sbjct: 73 PDAPNEGVQIVNAELSPVASPFFEPGPPGEEDIELARVVDRGFRSAKVVDLAKLSIIPSA 132
Query: 488 KVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIP 658
K W+L I+I L+HDGNL + A +A L ++ + P + +++ + L EKDP+P
Sbjct: 133 KCWTLYIDIYPLDHDGNLVDAAGLAALLALLDTKLPRTSVQENKIAV--LDEKDPLP 187
>UniRef50_A3H8A6 Cluster: 3' exoribonuclease; n=1; Caldivirga
maquilingensis IC-167|Rep: 3' exoribonuclease -
Caldivirga maquilingensis IC-167
Length = 279
Score = 109 bits (261), Expect = 1e-22
Identities = 64/199 (32%), Positives = 111/199 (55%), Gaps = 4/199 (2%)
Frame = +2
Query: 146 IQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIR 316
+++L+S+G R D R R L I G + G +V+LG TK+++ + E+ +P +
Sbjct: 17 LRRLISEGKRPDDRQLISMRDLTIRVGVIKTADGSALVNLGNTKVIAGIKFELGKPFEDT 76
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
PNEG + +N+E P+AAP FE + + + R++++ + S I L L I+ V+
Sbjct: 77 PNEGNLIVNLETPPLAAPTFEPGPPDENAIEIARIIDRALRHSNYIPLRDLVIIPGKSVY 136
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHY 676
S+ ++I VLNHDGNL + + +A +++IA+ + P DG+ V + T K P+ +
Sbjct: 137 SMWVDIYVLNHDGNLIDSSMLAAVSAIANAQVPRAIIDGENVKLDKST-KIPLNINPQNM 195
Query: 677 PVCTTFALYSND-ILLSDP 730
P+ T+ Y D L+ DP
Sbjct: 196 PLTVTY--YKIDKYLIVDP 212
>UniRef50_Q8U0M0 Cluster: Probable exosome complex exonuclease 2;
n=8; Euryarchaeota|Rep: Probable exosome complex
exonuclease 2 - Pyrococcus furiosus
Length = 277
Score = 107 bits (257), Expect = 4e-22
Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 3/207 (1%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPK 307
+ +I L+ + R+D R F + R +++ G G +V LG T++L + + +P
Sbjct: 12 RDYILNLLKEKKRIDDRGFEDYRPIEVEVGVIEKAEGSALVKLGNTQVLVGIKATLGEPF 71
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEX 487
PN G++ NVEL P+A+P FE + + L R++++ ++S+ ++LE + I
Sbjct: 72 PDTPNMGVMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESRALNLEKMVIAPGK 131
Query: 488 KVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVL 667
V + I++ VL+HDGNL + I +A++ + R P + + + L EK+P+P +
Sbjct: 132 IVRVVFIDVHVLDHDGNLMDAIGIGAIAALLNARVPKVLYNEETGEVEILEEKEPLP--V 189
Query: 668 YHYPVCTTFALYSNDILLSDPNSWKNQ 748
P+ TFA N L+ DP + Q
Sbjct: 190 EKIPISVTFAKIGN-YLVVDPTLEEEQ 215
>UniRef50_Q4QBI9 Cluster: Exosome complex exonuclease RRP45 homolog,
putative; n=3; Leishmania|Rep: Exosome complex
exonuclease RRP45 homolog, putative - Leishmania major
Length = 363
Score = 104 bits (249), Expect = 3e-21
Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Frame = +2
Query: 167 GHRLDGRNFNETRKLDISFGSEYGCCI-VSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 343
G R D R+ N+ R ++I F + V G T + ++C++ +P RP G ++
Sbjct: 29 GLRPDQRDANQLRVVEIDFPLLSRDVVQVKCGNTVATATISCDLVEPSPYRPKHGFFEVH 88
Query: 344 V-ELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKV 520
+L P ++ +++YL RLL ++ ESLC++ +VWS+ + +
Sbjct: 89 ARQLLNERDPLDQSKEIKRISMYLTRLLS-----GSVLETESLCVIPGRRVWSIDAEVII 143
Query: 521 LNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYPVCTTFAL 700
+N+DGN + A A + ++ H RRP+ T G+ VI+H E+DP+P L+H P+ TFA+
Sbjct: 144 VNNDGNAQDVAQWAVMTALQHVRRPELTIRGEDVIVHPPHERDPVPLPLHHIPLSFTFAV 203
Query: 701 YSN 709
+N
Sbjct: 204 CAN 206
>UniRef50_Q5CYG9 Cluster: RRP45-like archaeo-eukaryotic exosomal
rnase, PH domain; n=2; Cryptosporidium|Rep: RRP45-like
archaeo-eukaryotic exosomal rnase, PH domain -
Cryptosporidium parvum Iowa II
Length = 432
Score = 101 bits (243), Expect = 2e-20
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 20/218 (9%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPN 322
FI + G RLDGR NE R + I+ YG V++G T +LS V E+ P Q R +
Sbjct: 28 FIVSVREYGLRLDGRTMNEYRNVKINLNKNYGEVEVNIGRTHVLSVVKSELVAPSQERSS 87
Query: 323 EGIIFINVELNPMAA-PQFEANR--QTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKV 493
EG I V++ P++ P A R +T L + +E+ K++ ID E LCI+ V
Sbjct: 88 EGFISFTVDIGPLSINPTSHAFRHNRTTLGTEIANYIERILKETGAIDTEILCILSGVCV 147
Query: 494 WSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRD-----------GDR---VIIH 631
WS++ I VL DGNL + +ATL+ + H+R + D G+R + +
Sbjct: 148 WSVKCEIHVLFDDGNLFDACLMATLSGLKHYRYNEIDVDSFLKKSKCEGFGERDYQRLEN 207
Query: 632 TLTEKDPIPPVLYHYPVCTTFALYSNDILLS---DPNS 736
T+ + + IP ++H+P+ + + LS DPNS
Sbjct: 208 TIRKLEMIPFNVHHFPLSISIGYINGKEGLSYIVDPNS 245
>UniRef50_Q64CA6 Cluster: TRNA nucleotidyltransferase; n=4;
environmental samples|Rep: TRNA nucleotidyltransferase -
uncultured archaeon GZfos24D9
Length = 260
Score = 101 bits (242), Expect = 2e-20
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 3/205 (1%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEVAQPK 307
K ++ L+ +G R DGR F + R + + G V +G+T +L V E P
Sbjct: 11 KDYVYDLIEKGKRADGRGFLDFRDIIVERDLIKKADGSTRVQIGDTVVLVGVKVEPGAPF 70
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEX 487
PN+GI+ N EL P+A+P+FE+ + ++ L R++++ + S+ IDLE LCI
Sbjct: 71 PDTPNKGILMTNAELVPLASPEFESGPPNEDSIELARVVDRGIRGSETIDLEKLCIEEGE 130
Query: 488 KVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVL 667
KVW + I+I L++DGNL + A++ + S+ + P + R G LT +D + +
Sbjct: 131 KVWMVFIDIHTLDNDGNLVDAAALGAITSLLNVTIP-YERYG-------LTGEDTLQ--I 180
Query: 668 YHYPVCTTFALYSNDILLSDPNSWK 742
PV T ++L+ DPN ++
Sbjct: 181 RDTPVAVTVVEIGGNLLV-DPNVYE 204
>UniRef50_Q8TGX5 Cluster: Probable exosome complex exonuclease 2;
n=9; Archaea|Rep: Probable exosome complex exonuclease 2
- Methanosarcina acetivorans
Length = 266
Score = 101 bits (242), Expect = 2e-20
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPK 307
K +I L+ +G R DGR F + R L + G V+LG T++L V + P
Sbjct: 13 KDYIYNLMIKGKRQDGRGFKDFRDLKLETNVIVKAEGSAKVTLGNTQVLVGVKLQTGTPF 72
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEX 487
+EG+I N+ELNP+A+P+FE + + + R++++ ++S ID++ LCI V
Sbjct: 73 PDSQDEGVIITNLELNPIASPEFEPGPPREEAIEMARVVDRGIRESGAIDIKKLCITVGE 132
Query: 488 KVWSLRINIKVLNHDGNLTECASIATLASI 577
VW + I++ VLN DGN+ + + +A +A++
Sbjct: 133 SVWIVFIDVHVLNDDGNIIDASCLAAIAAL 162
>UniRef50_Q2NEX4 Cluster: Putative exosome complex, exonuclease 2
subunit; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
Putative exosome complex, exonuclease 2 subunit -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 265
Score = 99 bits (238), Expect = 7e-20
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEV 295
S K + L++QG R+D R F+E R + I G G +VS+G T ++ V ++
Sbjct: 6 SEVSKEKVFDLLNQGKRIDDRKFSEYRNISIKTNYIGKADGSAMVSIGCTTVIVGVKAQM 65
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
P PN GII N EL +A+ FE V + R++++ ++S +DL+ LC+
Sbjct: 66 TTPFNNAPNSGIIITNTELLAIASRNFEYGPPNKFAVEISRVVDRAIRESPVVDLDKLCV 125
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPI 655
+ K W L I++ +++ DGN+ + A + + ++ + P T ++I E++
Sbjct: 126 IEGSKSWKLHIDMYIVDFDGNIMDAACLGAICALLTTKIPTATSVNGEIVI---DEENLT 182
Query: 656 P-PVLYHYPVCTTFALYSNDILLSDPN 733
P P+ +CT + N+ L+ DP+
Sbjct: 183 PLPIKNRSILCTVVKI--NNQLIVDPS 207
>UniRef50_A0D7R2 Cluster: Chromosome undetermined scaffold_40, whole
genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_40, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 984
Score = 97.9 bits (233), Expect = 3e-19
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 10/211 (4%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGSEY-GCCIVSLGETKILSEVTCEVAQPKQIRP 319
F+ + ++ G R+DGR+ + R + FG + G +SLGET + S ++ P IRP
Sbjct: 775 FVLEQLTLGKRIDGRDPLQLRMIQSHFGPQITGAVELSLGETSV-SRMS-----PNPIRP 828
Query: 320 NEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWS 499
+EG + +++L + + N L + + + +EK K SK +D ESLCI+ VWS
Sbjct: 829 SEGFLKFHLDLQVLRDTGYMHN-PIKLDMEIEKYIEKVIKGSKALDTESLCILSGKNVWS 887
Query: 500 LRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYP 679
+ +N+ ++N+DGNL + + + S HFRRP + V + EK +P ++H P
Sbjct: 888 IDVNVALINNDGNLLDAMYLCCIFSQQHFRRPQVSVSLQGVKVE--VEKRLVPLSIHHIP 945
Query: 680 VCTTFA---LYSNDILLSD------PNSWKN 745
+ T A L ILL D + WKN
Sbjct: 946 LSLTQAILELNEQTILLQDSCLEEEDSEWKN 976
>UniRef50_Q6L224 Cluster: Ribonuclease PH; n=2;
Thermoplasmatales|Rep: Ribonuclease PH - Picrophilus
torridus
Length = 260
Score = 95.5 bits (227), Expect = 2e-18
Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEV 295
S + I + +G RLDGR N+ R + I G +V LG TK+++ V E
Sbjct: 10 SGLKRDMILNSIKRGKRLDGRGLNDFRDIKIFENYIPKASGSAMVELGRTKVVAGVKIEE 69
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
+P P++G++ +N+E+ PMA P FEA + + R++++ ++SK ID+ L I
Sbjct: 70 GEPFPDTPDQGVMALNIEMLPMAFPTFEAGPPGEEAIEYSRVVDRGIRESKMIDVTRLVI 129
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASI 577
KVW + I+I ++N+ GN+ + ++IA +A++
Sbjct: 130 EPGTKVWMVFIDIDIINYAGNIIDASTIAAVAAL 163
>UniRef50_UPI000049A2AB Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 265
Score = 95.1 bits (226), Expect = 2e-18
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Frame = +2
Query: 146 IQKLVSQGHRLDGRNFNETRKLDISFGS-EYGCCIVSLGETKILSEVTCEVAQPKQIRPN 322
++ L+ +G R+D R +E R ++SF E G +G +K L E E P + RP+
Sbjct: 4 VEGLLQKGIRIDARRLDEFR--EVSFVCREPGSVETHIGNSKALGECVVEPVCPGRSRPD 61
Query: 323 EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSL 502
+GI I V MA P F +R + + +++E+ ++ ID++ L I+ VW +
Sbjct: 62 QGIFNIRVNFLEMANPNFYDSRGPRDLIEIGKVVERGLLSTRAIDVDGLVIIRGKLVWKI 121
Query: 503 RINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYPV 682
+ + ++N GNL + SI ++++ R + G V I T E+ P+P ++H P+
Sbjct: 122 TVCVHIINDCGNLMDLVSITAISALLTAVRREVQICGTDVKILTPEERKPVPLAIHHIPI 181
Query: 683 CTTFALYSNDILLSDPN 733
+F + + + L DP+
Sbjct: 182 TVSFGITESGVPLLDPS 198
>UniRef50_Q9UXC0 Cluster: Probable exosome complex exonuclease 2;
n=5; Sulfolobaceae|Rep: Probable exosome complex
exonuclease 2 - Sulfolobus solfataricus
Length = 275
Score = 94.3 bits (224), Expect = 4e-18
Identities = 54/202 (26%), Positives = 105/202 (51%), Gaps = 3/202 (1%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPK 307
K I L +G R DGR + R L I+ G +V LG T +L+ E+ +P
Sbjct: 16 KESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPY 75
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEX 487
+ PN+G + +NVEL P+A FE + + L R++++ +DSK +DL L I
Sbjct: 76 EDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGK 135
Query: 488 KVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVL 667
VW++ +++ VL++ GN+ + ++A++A++ + + + + + ++ + + + +
Sbjct: 136 SVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGI---SVNKNEVVGKLP 192
Query: 668 YHYPVCTTFALYSNDILLSDPN 733
+YPV T + L+ DP+
Sbjct: 193 LNYPVVTISVAKVDKYLVVDPD 214
>UniRef50_Q8ZVN0 Cluster: Probable exosome complex exonuclease 2;
n=4; Pyrobaculum|Rep: Probable exosome complex
exonuclease 2 - Pyrobaculum aerophilum
Length = 274
Score = 94.3 bits (224), Expect = 4e-18
Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 3/198 (1%)
Frame = +2
Query: 146 IQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIR 316
I++L++ +R+DGR +TR ++I+ G + G V LG+T +++ V + QP
Sbjct: 20 IRRLLATKYRVDGRGPEQTRNVEINVGVVKTADGSAEVKLGKTHVVAGVKVGLGQPFPDA 79
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
P+EG++ +N E+ P A+P E + + L R++++ + +D + L V K +
Sbjct: 80 PDEGVLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGIRHCGYVDFKKLA-VEGGKAY 138
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHY 676
L I++ V+N DGNL + A++A++A++ + + P +D V+ K P+P +
Sbjct: 139 VLWIDLYVINDDGNLIDVANLASVAALKNTQLPVVVKDEAGVVKLDRNNKAPLPVDISKA 198
Query: 677 PVCTTFALYSNDILLSDP 730
P+ + N +L DP
Sbjct: 199 PIAVSVGKIGN-VLFLDP 215
>UniRef50_UPI000051A59D Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP43 (Ribosomal RNA-processing
protein 43) (Exosome component 8) (p9) (Opa-interacting
protein 2); n=3; Endopterygota|Rep: PREDICTED: similar
to Exosome complex exonuclease RRP43 (Ribosomal
RNA-processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) - Apis mellifera
Length = 281
Score = 93.5 bits (222), Expect = 6e-18
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 5/201 (2%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 313
++Q ++Q R DGR F R + ++ S I +G T I+ + E+A PK
Sbjct: 13 YLQDHLAQDVRPDGRQFLSFRPISVNISSITHADSSAIFKIGNTTIVCGIKSELAVPKAE 72
Query: 314 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKV 493
P G I N+EL P+ +P+F +D + +L+E ++S IDL+ LC+ V
Sbjct: 73 SPECGYIVPNIELPPLCSPKFRPGPPSDQAQVITKLVENILRNSAAIDLKELCVYKGKLV 132
Query: 494 WSLRINIKVLNHDGNLTECASIATLASIAHFRRPD--FTRDGDRVIIHTLTEKDPIPPVL 667
W L ++ +N+DG++ + A A++ P+ + + V I++ T++ P +
Sbjct: 133 WVLYCDLVCINYDGSIIDACIGALTATLNTLTLPEIFYNVETGHVSINS-TKRIRFP--I 189
Query: 668 YHYPVCTTFALYSNDILLSDP 730
PV TFA++ N +L++DP
Sbjct: 190 KALPVSITFAIFDNQLLIADP 210
>UniRef50_Q583T6 Cluster: Ribosomal RNA processing protein 45; n=2;
Trypanosoma brucei|Rep: Ribosomal RNA processing protein
45 - Trypanosoma brucei
Length = 363
Score = 93.1 bits (221), Expect = 8e-18
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Frame = +2
Query: 167 GHRLDGRNFNETRKLDISFGS-EYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 343
G R D R + R++ + F +V G + + + + + +P RP G++ +
Sbjct: 30 GLRPDQRTAQQMREVSVEFPLLSRDVVVVRCGGSVVTAAIATALVEPTPQRPKHGLLHFS 89
Query: 344 VEL--NPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIK 517
V +P + + Q +L +L RL+ + ID LC++ KVWSL +++
Sbjct: 90 VRRLHTERDSPAADGSTQKNLVAFLERLV----RTGGVIDTAGLCVLPGQKVWSLTVDVT 145
Query: 518 VLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYPVCTTFA 697
++N +GN + A A +A + H RRP+ T G VI+H E++P+P + H P+ TFA
Sbjct: 146 IMNDEGNCNDAAVWAVIALLMHHRRPELTVRGSSVIVHPPHEREPVPLSVQHTPLPFTFA 205
Query: 698 L 700
+
Sbjct: 206 I 206
>UniRef50_Q96B26 Cluster: Exosome complex exonuclease RRP43; n=37;
Eumetazoa|Rep: Exosome complex exonuclease RRP43 - Homo
sapiens (Human)
Length = 276
Score = 92.7 bits (220), Expect = 1e-17
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 313
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 72
Query: 314 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKV 493
P++G + NV+L P+ + +F + + + + ++S+ I E LCI V
Sbjct: 73 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 132
Query: 494 WSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYH 673
W L ++ L++DGN+ + + A LA++ + + P+ T + + + +K + H
Sbjct: 133 WVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTH 192
Query: 674 YPVCTTFALYSNDILLSDP 730
PV T+FA++ + +L+ DP
Sbjct: 193 -PVATSFAVFDDTLLIVDP 210
>UniRef50_Q7Q0D9 Cluster: ENSANGP00000011759; n=2; Culicidae|Rep:
ENSANGP00000011759 - Anopheles gambiae str. PEST
Length = 274
Score = 91.5 bits (217), Expect = 3e-17
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Frame = +2
Query: 173 RLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 343
R DGR E R L ISF S G IV +G T ++ + E+A P + P G + N
Sbjct: 24 RPDGRELEELRPLAISFDVIKSADGSAIVKVGNTTVVCGIKAELATPNALAPRHGFLVPN 83
Query: 344 VELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVL 523
V+L+P+++P + D + + +++CIDL+ LCI VW L ++ L
Sbjct: 84 VDLSPVSSPSYRPGPPCDEAQVYSQSVADAISNARCIDLQQLCISPGKLVWCLYCDLVCL 143
Query: 524 NHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYPVCTTFALY 703
+HDG + + A IA +A+ + P + D T + +P + PV T+F +
Sbjct: 144 DHDGCVLDAAIIALVAAFHTVKLPTIQYNSDTEETEADTSR-LLPLTVDCVPVTTSFVMV 202
Query: 704 SNDILLSDPNS 736
+ L++DP +
Sbjct: 203 AGR-LIADPTT 212
>UniRef50_Q9YC05 Cluster: Probable exosome complex exonuclease 2;
n=4; Desulfurococcales|Rep: Probable exosome complex
exonuclease 2 - Aeropyrum pernix
Length = 276
Score = 91.1 bits (216), Expect = 3e-17
Identities = 46/152 (30%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Frame = +2
Query: 155 LVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRPNE 325
L+ +G R R+ R + I G G +V LG+T++++ V V P + PN+
Sbjct: 22 LLRKGWRPGDRDLKTPRNVKIETGIIEKAEGSALVKLGKTQVIAGVKAGVGAPFKDTPNQ 81
Query: 326 GIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLR 505
G++ ++ E P+A+P FE + + L R++++ ++ +DLESL I KVW L
Sbjct: 82 GVLTVHAEFVPLASPVFEPGPPDENAIELARVVDRSLREVGAVDLESLVIRPGEKVWVLW 141
Query: 506 INIKVLNHDGNLTECASIATLASIAHFRRPDF 601
+++ +++HDGNL + + +AT+A + R P +
Sbjct: 142 VDLYIIDHDGNLFDASMLATMAVLLTARLPRY 173
>UniRef50_Q10205 Cluster: Putative exosome complex exonuclease
RRP43; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP43 - Schizosaccharomyces
pombe (Fission yeast)
Length = 270
Score = 87.4 bits (207), Expect = 4e-16
Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 6/204 (2%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEVAQPK 307
+ ++ L++Q R DGR+ +E R++ I+ + G I+ GE + + E+A+P
Sbjct: 23 EQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIKAEIAEPF 82
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEX 487
+ PNEG I N+EL+P+ + +F+ +DL + + L + + S I+L+SLCI +
Sbjct: 83 ENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQSLCIFEKK 142
Query: 488 KVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGD--RVI-IHTLTEKDPIP 658
W L +I LN+DG+ + A A A++ + P D D RVI TLT
Sbjct: 143 AAWVLYADIICLNYDGSAFDYAWAALFAALKTVKLPTAVWDEDLERVICASTLTR----- 197
Query: 659 PVLYHYPVCTTFALYSNDILLSDP 730
PV V + +D LL+DP
Sbjct: 198 PVQLSTEVRSFSWSVFDDKLLADP 221
>UniRef50_Q15024 Cluster: Exosome complex exonuclease RRP42; n=36;
Eumetazoa|Rep: Exosome complex exonuclease RRP42 - Homo
sapiens (Human)
Length = 291
Score = 82.2 bits (194), Expect = 2e-14
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEV 295
S K +I V + R+DGR + R +++ + G V LG T IL V E+
Sbjct: 7 SEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEM 66
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
PK +PNEG + V+ + A P+FE DL + L + + + +DL++LCI
Sbjct: 67 GTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLCI 126
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRP 595
W L +++ +L GNL + SIA A++ + R P
Sbjct: 127 SPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIP 166
>UniRef50_Q2QT85 Cluster: 3' exoribonuclease family, domain 1
containing protein, expressed; n=2; Oryza sativa
(japonica cultivar-group)|Rep: 3' exoribonuclease
family, domain 1 containing protein, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 284
Score = 79.8 bits (188), Expect = 8e-14
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 9/157 (5%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPK 307
KHFI+ ++Q R DGR + R + + G G V LG T++++ V E+ +P
Sbjct: 9 KHFIRGGIAQDLRTDGRRRLQFRAISVETGVIPQANGSARVRLGATEVIATVKAELGKPS 68
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSK-----CIDLESLC 472
+ P++G + I V+ +P AAP FE + + L L++C K IDL SL
Sbjct: 69 ILHPDKGKVSIFVDCSPTAAPMFEGRGSEEFSAELCVALQRCLLGGKSGAGAAIDLSSL- 127
Query: 473 IVVEXKV-WSLRINIKVLNHDGNLTECASIATLASIA 580
IVV+ KV W L I+ V++ DGNL + + A +++
Sbjct: 128 IVVDGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALS 164
>UniRef50_Q5KMZ6 Cluster: Opa-interacting protein OIP2, putative;
n=1; Filobasidiella neoformans|Rep: Opa-interacting
protein OIP2, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 297
Score = 77.4 bits (182), Expect = 4e-13
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Frame = +2
Query: 218 SFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTD 397
S + +G +V +G+T ++ V EV +P P EG + N++L +++P+F+ D
Sbjct: 82 SISTAHGSALVRMGDTTMVCGVKAEVGEPDAEAPGEGFVVPNIDLPALSSPKFKPGPPGD 141
Query: 398 LTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVLNHDGNLTECASIATLASI 577
L + SK I L SL I W L I++ +N+DGN + A +A +A++
Sbjct: 142 EAQTYSNWLYELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYDGNAFDAAVLAVMAAL 201
Query: 578 AHFRRPDFTRDGD-RVIIHTLTEKDPIPPVLYHYPVCTTFALY 703
+ R P D D + I + TE+ P+ L P+ +F ++
Sbjct: 202 RNTRLPKAVYDDDTQRTICSRTERYPLS--LGRMPLACSFGIF 242
>UniRef50_A0RXU0 Cluster: RNase PH-related exoribonuclease; n=1;
Cenarchaeum symbiosum|Rep: RNase PH-related
exoribonuclease - Cenarchaeum symbiosum
Length = 270
Score = 77.4 bits (182), Expect = 4e-13
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 3/199 (1%)
Frame = +2
Query: 146 IQKLVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQIR 316
I L+ +G R+DGR +E RKL I + G V LG T +++ V + +P
Sbjct: 15 IAALLERGERIDGRRLDEPRKLTIETNAIPKAEGSARVHLGRTDVVTGVKVQPDRPFPDV 74
Query: 317 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
+ GI E+ P+A P E + + L R++++ ++S +DL L ++ + V
Sbjct: 75 GDRGIFICTAEILPLAHPDVETGPPSPAVIELARVVDRGIRESGMVDLSKLVLLKDKSVI 134
Query: 497 SLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHY 676
+ + V++ DGNL + S A A+I + P + + + + + P+P +
Sbjct: 135 GIFADSSVIDVDGNLFDACSYAATAAILTAKLPKWEIQDEAPV--RIEGETPVP--VTTI 190
Query: 677 PVCTTFALYSNDILLSDPN 733
PV T A + IL+ DPN
Sbjct: 191 PVSVTMAKINGHILV-DPN 208
>UniRef50_Q9ZUI4 Cluster: T2K10.14 protein; n=10; Magnoliophyta|Rep:
T2K10.14 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 302
Score = 75.4 bits (177), Expect = 2e-12
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQI 313
F ++ +S+ R DGR + R ++ G + G + +G T +L+ + EV P
Sbjct: 27 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 86
Query: 314 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKV 493
P+EG I I + P+ +P R + + + L S IDL+ LC+V
Sbjct: 87 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLVSGKAA 146
Query: 494 WSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKD 649
W ++I L+ DG L + A +A +A+ ++ + P + + I+ EKD
Sbjct: 147 WMGYLDIYCLDADGALFDAALLAAVAAFSNLQIPIVALNDNGRIVAVTGEKD 198
>UniRef50_Q29QQ9 Cluster: IP10364p; n=8; Endopterygota|Rep: IP10364p
- Drosophila melanogaster (Fruit fly)
Length = 296
Score = 74.9 bits (176), Expect = 2e-12
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEV 295
S K +I V R DGR+ + R +D+ G + G + L T IL V E+
Sbjct: 7 SEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILVGVKTEI 66
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
P + P G + V+ + A P+FE +DL L+ L+ Y+ + +LC+
Sbjct: 67 DVPNPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFNYRTLCL 126
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFT 604
+ + W L I+I +L GNL + S+A A++ + + P T
Sbjct: 127 IPGQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVT 169
>UniRef50_Q5DA97 Cluster: SJCHGC04772 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04772 protein - Schistosoma
japonicum (Blood fluke)
Length = 277
Score = 73.3 bits (172), Expect = 7e-12
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Frame = +2
Query: 125 SNCXKHFIQKLVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEV 295
S+ + ++ + + G R+DGR +E R L+I G + +GET I+ V EV
Sbjct: 7 SDLERFYLIQGIEVGCRMDGRGPSEYRPLEIETNILSHATGSASIRIGETFIVCCVKMEV 66
Query: 296 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 475
+P R NEG I INVE P A + ++L L L+ Y+ S+ I+L SLCI
Sbjct: 67 GKPSLTRLNEGRIEINVECYPTATYRCNEKGASELAERLKTTLQSTYQ-SEFINLNSLCI 125
Query: 476 VVEXKVWSLRINIKVLNHDGNLTECASIATLASI 577
+ W + I++ +L GNL + +S+ A++
Sbjct: 126 QRGRQCWVIYIDLLILEGAGNLLDASSLVIKAAL 159
>UniRef50_UPI0000E49695 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 336
Score = 71.3 bits (167), Expect = 3e-11
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Frame = +2
Query: 173 RLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 343
R DGR R ++ G + G + L T++L V E+ P + P+ G I
Sbjct: 163 RSDGRTCLSYRNFELECGVVSNTSGSARLKLSNTQVLVGVKAEMGPPNPLNPSRGGIEFF 222
Query: 344 VELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVL 523
V+ + A+P+F +L + +L YK+ K +D +SLC++ VW+L +I VL
Sbjct: 223 VDFSANASPKFAGRGGDELAAEISNMLGLVYKNKKMLDYKSLCVIAGQCVWTLYADIVVL 282
Query: 524 NHDGNLTECASIATLASIAHFR 589
GNL + ++A A++ + R
Sbjct: 283 ECGGNLLDAIALAVKAALYNTR 304
>UniRef50_A2DPV1 Cluster: Nucleolar autoantigen-like protein,
putative; n=1; Trichomonas vaginalis G3|Rep: Nucleolar
autoantigen-like protein, putative - Trichomonas
vaginalis G3
Length = 315
Score = 70.1 bits (164), Expect = 7e-11
Identities = 61/194 (31%), Positives = 88/194 (45%)
Frame = +2
Query: 149 QKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEG 328
++++S G R DGR+ NE R+L + F G IV LG T + V + PN+G
Sbjct: 18 REMLSNGLRPDGRDPNEPRRLTVDFSD--GAAIVKLGSTIVSCRVIKNQVLADENHPNQG 75
Query: 329 IIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRI 508
I + F A T+ VR + +K + +DLESL I + VW L+
Sbjct: 76 FFSIGLSSTHKIDSYFRAE-----TLNAVRDM---FKMNNALDLESLVIQIGKLVWELKC 127
Query: 509 NIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLYHYPVCT 688
I +L +DG L E ++A + + P TR GDR +LT L+H P+
Sbjct: 128 EIVILENDGGLFEAMTLAVGCGLLATKLPS-TR-GDR----SLT--------LHHLPIPI 173
Query: 689 TFALYSNDILLSDP 730
TFAL DP
Sbjct: 174 TFALIDQRTRFVDP 187
>UniRef50_Q4P345 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 332
Score = 70.1 bits (164), Expect = 7e-11
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 31/232 (13%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 313
++ + + R DGR R I+ GS G V +G T ++ + EVA P+
Sbjct: 21 YLSRFLDASIREDGRPLAAFRDATITLGSISTADGSSFVRIGNTSCIAAIKAEVATPQLS 80
Query: 314 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKV 493
RP EG + NVEL + + +F+ D L L S +D + LCI V
Sbjct: 81 RPREGYLIPNVELPAVCSSKFKPGAPGDEAQVLTSRLLALLNSSNLLDRQLLCIQDAIAV 140
Query: 494 WSLRINIKVLNHDGNLTECASIATLASI--AHFRRPDFTRDGDR------VIIHTLTEKD 649
W L ++I + DGN + A +A ++++ + F +T R ++ T T K
Sbjct: 141 WCLYLDISFICFDGNAMDAAVLAAVSALSDSKFAIHTYTLSHSRPSSLTDALVLTPTAKT 200
Query: 650 -PIPPVLY-------------------HYPVCTTFALYSNDILLSDPNSWKN 745
+P Y H P ++F+++ N LLSDP ++++
Sbjct: 201 AKLPAATYDPDTEQVRCSSSRTALHLEHVPFASSFSIFENQYLLSDPTAFES 252
>UniRef50_Q8SVE0 Cluster: Putative uncharacterized protein
ECU06_0390; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU06_0390 - Encephalitozoon
cuniculi
Length = 218
Score = 68.1 bits (159), Expect = 3e-10
Identities = 44/136 (32%), Positives = 72/136 (52%)
Frame = +2
Query: 146 IQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNE 325
++ LV G R D R E R+L++ S C+V++G +++L+ ++P RP+E
Sbjct: 3 VKNLVKAGERFDNRKIEEARRLEVERISN--SCLVTMGASQLLTVFQKSTSRPYIDRPHE 60
Query: 326 GIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLR 505
GI+ +V A ++E LV L K Y K IDLESLCI + +V +
Sbjct: 61 GIVSFSVSTG---AKKYER---------LVNFLHKVYIKQKSIDLESLCIRLNEEVVLIH 108
Query: 506 INIKVLNHDGNLTECA 553
I+++VL+ DG++ A
Sbjct: 109 IDLRVLSGDGSIYSLA 124
>UniRef50_A2F1P7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 329
Score = 64.5 bits (150), Expect = 3e-09
Identities = 45/145 (31%), Positives = 71/145 (48%)
Frame = +2
Query: 167 GHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINV 346
G R DGR F+E+RKL + + G V LG T++ + T +A P P +G I +
Sbjct: 18 GIRGDGRRFDESRKLIVQEITTPGVANVQLGNTRVTAITTARLAMPALSTPKKGTHNIYI 77
Query: 347 ELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVLN 526
N P ++ + T + R++ +K + ++ ESLC+ V KVW L + + +
Sbjct: 78 -FND--TPVQKSTAEAFQTYF--RMI---WKSCRILEDESLCVKVGEKVWMLTTRLIIHD 129
Query: 527 HDGNLTECASIATLASIAHFRRPDF 601
DG + E A LAS+ R P F
Sbjct: 130 DDGGILEAGFAAILASLGSLRFPSF 154
>UniRef50_Q5BWV4 Cluster: SJCHGC04363 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04363 protein - Schistosoma
japonicum (Blood fluke)
Length = 103
Score = 64.1 bits (149), Expect = 4e-09
Identities = 26/73 (35%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Frame = +2
Query: 146 IQKLVSQGHRLDGRNFNETRKLDISF--GSE---YGCCIVSLGETKILSEVTCEVAQPKQ 310
+ +++ G+RLDGR+ NE R++ F G + GCC+V +G T ++++V+ EV +PK
Sbjct: 10 LTEMLLSGYRLDGRSINEYREISFRFPQGKDPNISGCCVVKIGATTVMAQVSVEVIEPKH 69
Query: 311 IRPNEGIIFINVE 349
RP++G++F++ +
Sbjct: 70 FRPSQGMLFVHFD 82
>UniRef50_Q54CU6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 293
Score = 62.5 bits (145), Expect = 1e-08
Identities = 48/209 (22%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 313
F +K + + R DGR+ ++ RK IS GS G V +G T ++ V EV + I
Sbjct: 12 FYRKYLVRSVRPDGRSLDDIRKTTISTGSITTADGSSFVKIGSTSVVCGVRAEVGEKPSI 71
Query: 314 RPNEGI---------IFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 466
++ IFIN+EL P+ + F +++ +D+ + L L + + +
Sbjct: 72 DKSKFSTLNVHENKNIFINIELGPICSNTFSSSKPSDIAMSLCSRLNSLINRLEIPETDY 131
Query: 467 LCIVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEK 646
+W L +++ L++DGN+ + A ++ ++++ + + P + + L E
Sbjct: 132 YFDEEGKALWYLYVDVYCLDYDGNIYDAAVLSIISALKNVKLPKGIIENNDEFYKDL-ES 190
Query: 647 DPIPPVLYHYPVCTTFALYSNDILLSDPN 733
+ HY + +F++ +D +L+DP+
Sbjct: 191 PQRKLNIQHYLIPLSFSVI-DDYILADPS 218
>UniRef50_Q9SSE1 Cluster: MLP3.20 protein; n=5; core
eudicotyledons|Rep: MLP3.20 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 297
Score = 59.7 bits (138), Expect = 1e-07
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPK 307
+HFI+ ++Q R DGR R + + G G V +G T +++ V E+ +P
Sbjct: 8 QHFIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAEIGRPS 67
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKC------------ 451
++P++G + + ++ +P A P F +L+ L L++C K
Sbjct: 68 SLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGLQSSIHVLV 127
Query: 452 ----IDLESLCIVVEXKV-WSLRINIKVLNHDGNLTECASIATLASIAHFRRP 595
I+L SL ++ E KV W L I+ V++ DGNL + A A++ + P
Sbjct: 128 PGAGINLSSL-LIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIP 179
>UniRef50_Q4UI91 Cluster: Exosome ribonuclease PH (Rrp42 homologue),
putative; n=2; Theileria|Rep: Exosome ribonuclease PH
(Rrp42 homologue), putative - Theileria annulata
Length = 268
Score = 58.4 bits (135), Expect = 2e-07
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDI--SFGS-EYGCCIVSLGETKILSEVTCEVAQPKQI 313
F++ +S RLDGR F + L+I + S +G V+ G+ + + V + P+
Sbjct: 3 FVKSAISSNLRLDGRKFEQLYSLNIIPNISSIAHGSSQVTFGDNIVQTTVNFSIVSPEDS 62
Query: 314 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKV 493
P+EGII + + + + R ++ L +L +DL+SLCI+
Sbjct: 63 TPDEGIIDLTITGTNIFENSELSQRNYEI---LCNILYDLEFQHAFLDLKSLCILPGQLC 119
Query: 494 WSLRINIKVLNHDGNLTECASIATLASIAHFRRPD 598
W++RI+ V+ G + + SI L+S+ PD
Sbjct: 120 WNIRIHSTVVKRGGCVIDALSIGVLSSLMCSDVPD 154
>UniRef50_A7SQ50 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 225
Score = 58.4 bits (135), Expect = 2e-07
Identities = 41/147 (27%), Positives = 67/147 (45%)
Frame = +2
Query: 290 EVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESL 469
E A+P PN+G I NV+L P+ +P F ++ L ++ L+
Sbjct: 18 EFAEPAADVPNKGFIVPNVDLPPLCSPSFRPGPPSEHAQVLSTFIDNLITKRSMELLQH- 76
Query: 470 CIVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKD 649
+ VW L I++ L++DGN+ + A IA LA++ + R T + + KD
Sbjct: 77 ---AKYLVWVLYIDLMCLDYDGNVADAAVIAMLAALQNTRLHTVTINEETETPEPSENKD 133
Query: 650 PIPPVLYHYPVCTTFALYSNDILLSDP 730
I L PV TF ++ +D + DP
Sbjct: 134 -IHLKLKSMPVAVTFGIFDDDHIYCDP 159
>UniRef50_Q7QP16 Cluster: GLP_83_5565_6509; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_83_5565_6509 - Giardia lamblia ATCC
50803
Length = 314
Score = 57.2 bits (132), Expect = 5e-07
Identities = 43/157 (27%), Positives = 72/157 (45%)
Frame = +2
Query: 128 NCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPK 307
N H ++ L + R+DGR ETR + +SF + G +V G+TK+ + + K
Sbjct: 2 NAIPHALEILYTDT-RIDGRGIGETRDISLSFFTARGSVLVEKGKTKVAASSKLAILSGK 60
Query: 308 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEX 487
Q+R G I + L P ++T V L LL + + + ++L I+
Sbjct: 61 QLR--SGRITVTCNL-PSEL------KETIEHVNLADLLNNTFASDQVVPKDTLVIIPGA 111
Query: 488 KVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPD 598
+ +R +++VL DG L + IA SI H P+
Sbjct: 112 MYFVIRCSVEVLQDDGGLRDACIIAAGTSIYHMGIPN 148
>UniRef50_UPI0000498B14 Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 265
Score = 56.8 bits (131), Expect = 7e-07
Identities = 46/211 (21%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Frame = +2
Query: 140 HFIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQ 310
+FI++ + R DGR + R++ G G + LG+T+++ V CE+ +P
Sbjct: 10 NFIKEGIKTNIRTDGRANIQFREIKCEKGVIDQANGSVRLCLGKTEVVVGVKCELGEPSV 69
Query: 311 IRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXK 490
+ P G NV + + +R ++ ++ LE KD L+ LC++
Sbjct: 70 LTPESGRY--NVLVKQVGTM---TSRDVEIEKMILVSLENAGKDM----LQELCVLKGKL 120
Query: 491 VWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDF-TRDGDRVIIHTLTEKDPIPPVL 667
W + +++ V+ DGN+ +C +A A++ + P GD + +KD +
Sbjct: 121 CWIIYVDVVVVEDDGNVMDCTGLAVRAALLNTLIPIVNVISGDSDTVQVDIDKDNVQFKK 180
Query: 668 Y---HYPVCTTFALYSNDILLSDPNSWKNQC 751
+ P+C + + + ++DP+ + +C
Sbjct: 181 FKPESVPLCVSLIQFEKE-FIADPSKVEEKC 210
>UniRef50_Q4YPT7 Cluster: Exoribonuclease PH, putative; n=5;
Plasmodium|Rep: Exoribonuclease PH, putative -
Plasmodium berghei
Length = 281
Score = 55.2 bits (127), Expect = 2e-06
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQI 313
+I++ ++ R+DGR R ++I+ S G V E ++ + + P+Q
Sbjct: 6 YIEEGINSNIRVDGRTLLTYRTIEINKSILVSADGSSSVMNEENNVICGIKLSLLPPEQH 65
Query: 314 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKV 493
+EG F+N++++ A+ ++ L + + + C K++ ID + LC++ V
Sbjct: 66 SIDEG--FVNLQIDCPASVASNRIKKEHLQIMTSIIYDLCIKNN--IDKKKLCVLPSKFV 121
Query: 494 WSLRINIKVLNHDGNLTECASIATLASIAHFRRP 595
W + IN+ VLN G L + SIA ++ P
Sbjct: 122 WGIDINVMVLNGGGGLLDIISIAIYVALNDMNIP 155
>UniRef50_A7ARR1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 267
Score = 54.8 bits (126), Expect = 3e-06
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKL----DISFGSEYGCCIVSLGETKILSEVTCEVAQPKQ 310
FI+ ++ RLDGR ++ K+ ++S G+ +G V L +T +++ + V P
Sbjct: 3 FIRNALAANCRLDGRRLDDNPKILIEPNVSTGA-HGSAKVILDDTVVITTIMFHVTSPNT 61
Query: 311 IRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXK 490
P EG + I + +P + +++ D + +LE + + + LCI+
Sbjct: 62 NSPEEGNVEITLG-SPFTLEDSDISQKRDER--MAHILEMLQFHKQLFNRKLLCILSGQY 118
Query: 491 VWSLRINIKVLNHDGNLTECASIATLASI 577
VW++RI+ VL G + + S+A + ++
Sbjct: 119 VWTMRIHTTVLQRGGGVMDAVSVAVICAM 147
>UniRef50_Q8MPG3 Cluster: Exosome-associated protein 2; n=3;
Trypanosoma|Rep: Exosome-associated protein 2 -
Trypanosoma brucei
Length = 294
Score = 45.6 bits (103), Expect = 0.002
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVS--LGETKILSEVTCEVA---- 298
+H Q LV Q RLDGR + R+ I S+ G +++ L + C V+
Sbjct: 17 QHVHQFLV-QNKRLDGRPLDALREPHILRDSKGGDGLLASTLYTDNTGMCLNCTVSGVFG 75
Query: 299 QPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDS--KCIDLESLC 472
P +P+EG + ++V AAP F+++ TD +R + + + + C+DL L
Sbjct: 76 PPPSDQPDEGRLTVDV-----AAPFFQSH-STDQVAAALREVARFVRSTIISCMDLTELN 129
Query: 473 IVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRP 595
I+ W L++ + +LN DG L A A +A+I + P
Sbjct: 130 IINGEACWVLQVELVILNADGGLRAAALHAVVAAIHNMLLP 170
>UniRef50_O45424 Cluster: Putative uncharacterized protein exos-7;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein exos-7 - Caenorhabditis elegans
Length = 312
Score = 43.2 bits (97), Expect = 0.009
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +2
Query: 173 RLDGRNFNETRKLDISFG---SEYGCCIVSLGETK-ILSEVTCEVAQ---PKQIRPNEGI 331
R DGR+ + R++ + G G C V LG+T +L+ + E+ + P + I
Sbjct: 22 RNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLAGIKLELESYDAETEKEPKQPI 81
Query: 332 IFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLE---SLCIVVEXKVWSL 502
F NV+ + A+ QF + L + Y SK +D+ + + + W +
Sbjct: 82 NF-NVDFSANASSQFAGKGGDEYAEELSAAFQAAY--SKALDIMPNLAKTQLADGYRWKI 138
Query: 503 RINIKVLNHDGNLTECASIATLASIAHFRRPD 598
++I VL DG++++ SIA + +++ P+
Sbjct: 139 NVDISVLQWDGSVSDAISIAIIGALSDLEFPE 170
>UniRef50_Q5CZ14 Cluster: RPR45-like archaeo-eukaryotic exosomal
RNAse PH; n=2; Cryptosporidium|Rep: RPR45-like
archaeo-eukaryotic exosomal RNAse PH - Cryptosporidium
parvum Iowa II
Length = 291
Score = 41.9 bits (94), Expect = 0.021
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETR--KLDIS--FGSEYGCCIVSLGETKILSEVTCEVAQPKQ 310
++ + + QG R DGR R KL+++ S YG V +G + ++ + ++
Sbjct: 14 YLNRFLEQGVRCDGRKPEVCRNFKLELNELSSSNYGAVSVRIGNSSYIACCSPQIIHTGL 73
Query: 311 IRPNEGIIF---INVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVV 481
+ + I INV L F N + + ++ + +C DS+ I+ E+
Sbjct: 74 DQESNNAITNTRINVSLELPTICGFTGN--PNHSNFVSNSITECLNDSRIINKEAFITKF 131
Query: 482 EXKV--WSLRINIKVLNHDGNLTECASIATLASI 577
+ K W + I + L++DGN + IA++AS+
Sbjct: 132 QGKELHWLIDIKVVCLSYDGNPLDYTLIASIASL 165
>UniRef50_Q4Q1B7 Cluster: Exosome complex exonuclease RRP41,
putative; n=7; Trypanosomatidae|Rep: Exosome complex
exonuclease RRP41, putative - Leishmania major
Length = 246
Score = 39.1 bits (87), Expect = 0.14
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Frame = +2
Query: 167 GHRLDGRNFNETRKLDISFGSEYGC---CIVSLGETKILSEV--TCEVAQPKQIRPNEGI 331
G RLDGR E R++DI+FG+ C C ++LG++K+ + V E ++ + ++G+
Sbjct: 12 GLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEAKHDKGL 71
Query: 332 IFINVELNPMAA-----PQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
+ V + A PQ + D+ +V++ S+ ++ +
Sbjct: 72 VTCEVAVAAFAGENRRNPQRRSKLSEDIGAAVVQV------------ARSVILLSQYPNS 119
Query: 497 SLRINIKVLNHDGN-LTECASIATLASI 577
+ I I+VL DGN C + A LA I
Sbjct: 120 QIHIYIEVLQQDGNEKIACVNAACLALI 147
>UniRef50_A0RXU1 Cluster: RNase PH; n=1; Cenarchaeum symbiosum|Rep:
RNase PH - Cenarchaeum symbiosum
Length = 243
Score = 38.7 bits (86), Expect = 0.19
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Frame = +2
Query: 155 LVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEV--TCEVAQPKQIRP 319
L G R DGR +ETR+++I+ G + G + G+ KIL+ + +V +R
Sbjct: 11 LDENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRDVHPKHMVRT 70
Query: 320 NEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWS 499
GI+ ++P + + + + + + +++++ LE ++ + +
Sbjct: 71 ETGILRCRYHMSPFSVSERKKPAPSRREIEISKVIKEA--------LEPSLMLEQFPRTA 122
Query: 500 LRINIKVLNHDGNLTECASIATLASIA 580
+ + I+VL DG + CA++A AS+A
Sbjct: 123 VDVFIEVLQADGG-SRCAALAA-ASVA 147
>UniRef50_UPI0000E4A2CF Cluster: PREDICTED: similar to Exosc7
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Exosc7 protein,
partial - Strongylocentrotus purpuratus
Length = 209
Score = 38.3 bits (85), Expect = 0.25
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +2
Query: 440 DSKCIDLESLCIVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRP 595
+++ +D +SLC++ VW+L +I VL GNL + ++A A++ + R P
Sbjct: 36 NTQMLDYKSLCVIAGQCVWTLYADIVVLECGGNLLDAIALAVKAALYNTRIP 87
>UniRef50_A3FQP8 Cluster: Exoribonuclease PH, putative; n=2;
Cryptosporidium|Rep: Exoribonuclease PH, putative -
Cryptosporidium parvum Iowa II
Length = 295
Score = 38.3 bits (85), Expect = 0.25
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Frame = +2
Query: 104 KCVXTCXSNCXKHFIQKLVSQGHRLDGRNFNETRKLDISF---GSEYGCCIVSLGETKIL 274
K + S+ K F++ V QG R DGR+ + R + I+ + G + E I+
Sbjct: 14 KSMTKSISDSEKLFLEDGVDQGIRNDGRDLTDFRPIVIALDVISTANGSSRIRNDELDII 73
Query: 275 SEVTCEVAQPKQIRPNEGIIFINVELNPMA--APQFEANRQTDLTVYLVRLL-EKCYKDS 445
V I+F + ++ ++ AP F + D + Y+ ++ + C+K+
Sbjct: 74 VAVKVSFLNNLFFFIIALILFSSNIMDKISNVAPSFT---EEDYSFYITNIVKDMCFKN- 129
Query: 446 KCIDLESLCIVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRP 595
DL L I+ W++ I+ +L+ GN+ + +IA ++ R P
Sbjct: 130 --FDLSKLTILENKLYWNIYIDATILSFGGNMVDWVTIAIHTALRTTRIP 177
>UniRef50_Q01CP9 Cluster: Exosc8 protein; n=2; Ostreococcus|Rep:
Exosc8 protein - Ostreococcus tauri
Length = 294
Score = 37.5 bits (83), Expect = 0.44
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Frame = +2
Query: 455 DLESLCIVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHT 634
DL LCI W L +++ VL+ DG + A A +A++ P+ T +++I
Sbjct: 129 DLSDLCIERGVFAWRLMLDVVVLDDDGAAADAALSAAVAALRDVVLPEATVKRGKIVIGD 188
Query: 635 LTE---------KDPIPPVLYHYPVCTTFALYSNDILLSDP 730
E + P + PVC T ALY +L+ DP
Sbjct: 189 EEEGVDGADDGMRKGTPLNVRTTPVCLTTALYKEHLLV-DP 228
>UniRef50_Q54VM4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 324
Score = 37.5 bits (83), Expect = 0.44
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQ-PKQ 310
FIQ+ V R DGRN + R I G G V L +T++L V E+ +
Sbjct: 11 FIQQGVENNIRSDGRNRVDYRNFAIETGEIIHANGSARVKLSQTEVLVGVKAEITHIQSE 70
Query: 311 IRPN-------EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCI 454
I N + ++F +V P A+P+FE L + L + LE+ Y I
Sbjct: 71 ITSNLQQSDTSKRLVF-SVNCCPSASPEFEGKGSEFLNIELSKQLERLYSHPNVI 124
>UniRef50_Q7QPU9 Cluster: GLP_16_6871_9435; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_16_6871_9435 - Giardia lamblia ATCC
50803
Length = 854
Score = 36.7 bits (81), Expect = 0.77
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +2
Query: 146 IQKLVSQGHRLDGRNFNETRKLDISFGSEYGCC-IVSLGETKILSEVTCEVAQPKQIRPN 322
I+ L Q HRLD + T L+ E C ++S G + L E + E+ +
Sbjct: 53 IRDLARQAHRLDHESI--TPLLEAFVDDEQECIFLISRGAGQSLYEYSEELCFLQVNLEE 110
Query: 323 EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 466
E II I VEL + NR+TD T L L D CI L S
Sbjct: 111 EVIITILVELINAILYVYSTNRKTDFTDALASNLPSTGLDPLCIRLSS 158
>UniRef50_A6NT19 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 716
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 137 KHFIQKLVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPK 307
K ++ + QGHR+DGR NE R L G +G + + G+T++LS T
Sbjct: 310 KKIVKAWLLQGHRVDGRAKNEIRPLSAEVGVLPKVHGSGLFTRGQTQVLSVATLNTLAAS 369
Query: 308 Q 310
Q
Sbjct: 370 Q 370
>UniRef50_A2FQU8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 262
Score = 35.5 bits (78), Expect = 1.8
Identities = 42/205 (20%), Positives = 90/205 (43%), Gaps = 11/205 (5%)
Frame = +2
Query: 155 LVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNE 325
L+ + R DGR+FN++R + I+ F ++SLG+T I +++ VA P+ I P+
Sbjct: 14 LLKEHSRNDGRSFNDSRPIRITEKCFKDGQSSSLISLGKTIIATKI---VATPQPIAPSF 70
Query: 326 GIIFINVELNPMAAP-QFEANRQTDLTVYLVRLLEKCYKDSKCIDLES-LCIVVEXKVWS 499
++ ++ ++ + +TV + +LL + D + ++ W+
Sbjct: 71 NVVINRSAVSLVSGKGAVDQTLSAFITVLVNKLLPMSELEIARPDPHNPFHSNIKIWGWN 130
Query: 500 LRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVLY--H 673
L+ +++ DG + + + ++ P++ D + ++ T LY +
Sbjct: 131 LKFYQTIISDDGGVEVASVLGIQNTLQTLELPNYNLDDEAKLVDAGTSHKINILSLYAKN 190
Query: 674 YPVCTTFALYSND----ILLSDPNS 736
+ + T ND I+L DP S
Sbjct: 191 FSILTDDCDPDNDDVNKIILVDPTS 215
>UniRef50_Q00YJ4 Cluster: Exosomal 3'-5' exoribonuclease complex,
subunit Rrp42; n=2; Ostreococcus|Rep: Exosomal 3'-5'
exoribonuclease complex, subunit Rrp42 - Ostreococcus
tauri
Length = 314
Score = 34.7 bits (76), Expect = 3.1
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 25/171 (14%)
Frame = +2
Query: 158 VSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRPNE- 325
V+ R DGR R L ++ G + G C V+LGET ++ V C+V + ++
Sbjct: 12 VADDCREDGRGRATRRALRMAIGVVPNANGSCAVTLGETSCVAAVRCDVTAIEAWEASDV 71
Query: 326 GIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYK---------------------D 442
G I + V+ + +A + A R + L R LE D
Sbjct: 72 GAIVLRVDASSIATTR--AGRAAAVGETLRRRLESVVAGRERGVSDASGRASGSGVDAWD 129
Query: 443 SKCIDLESLCIVVEXKVWSLRINIKVLNHDGNLTECASIATLASIAHFRRP 595
IDL SLC+ W+L ++ G++ + S+A ++A + P
Sbjct: 130 GGGIDLRSLCVRPGRARWTLAVDAVCACDRGSMLDALSVAVRGALADTKIP 180
>UniRef50_A5KBP5 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 271
Score = 34.7 bits (76), Expect = 3.1
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = +2
Query: 173 RLDGRNFNETRKLDISFGSE-YG--CCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 343
R++ R NE R + I GS+ Y C SLG TKIL+ + K ++G +F+
Sbjct: 32 RINNRKNNEIRDMFIKLGSDGYSDASCFYSLGNTKILALIYGPKPDSKNATYDKGKVFL- 90
Query: 344 VELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLRINIKVL 523
E+ + AN ++D + LL +C +D C S+ I ++
Sbjct: 91 -EIRSLNMNDDGANDESDENI--KNLLIECVSSVILLDQYPQC--------SINIKCLII 139
Query: 524 NHDGNLTECASIATLASIA 580
+DG C S ATL I+
Sbjct: 140 QNDGG---CLS-ATLTCIS 154
>UniRef50_O96177 Cluster: Putative uncharacterized protein PFB0415c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0415c - Plasmodium falciparum
(isolate 3D7)
Length = 256
Score = 33.9 bits (74), Expect = 5.5
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +2
Query: 119 CXSNCXKHFIQKLVSQGH-RLDGRNFNETRKLDISFGSE--YGC-CIVSLGETKILSEVT 286
C S K + + L + R++ R NE R + I G + +G C SLG TKIL+ V
Sbjct: 13 CKSKFDKIYEENLNNGSFKRINNRKNNEIRDMFIKLGEDENFGSSCFYSLGNTKILTTVY 72
Query: 287 CEVAQPKQIRPNEGIIFINVE 349
K ++G +F++V+
Sbjct: 73 GPNPDSKYATYSKGKVFLDVK 93
>UniRef50_UPI00006A0892 Cluster: Hook-related protein 1; n=1;
Xenopus tropicalis|Rep: Hook-related protein 1 - Xenopus
tropicalis
Length = 1347
Score = 33.5 bits (73), Expect = 7.2
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 659 PVLYHYPVCTTFALYS-NDILLSDPNSWKNQCVQV--IQRKXSXCRR 790
PVLY P+ T YS N I SDP++WKN+ + V +Q K R+
Sbjct: 141 PVLYITPLRTRQDKYSFNSIKTSDPHNWKNRSLHVADLQSKLRRARQ 187
>UniRef50_A5TWD5 Cluster: Possible replication protein; n=1;
Fusobacterium nucleatum subsp. polymorphum ATCC
10953|Rep: Possible replication protein - Fusobacterium
nucleatum subsp. polymorphum ATCC 10953
Length = 681
Score = 33.5 bits (73), Expect = 7.2
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 206 KLDISFGSEYGC-CIVSLGETKILSEVTCEVAQ-PKQIRPNEGIIFINVELNPMAAPQFE 379
K+D GS+YGC C+ +LGE + + T EVA+ P + N+ + EL + A
Sbjct: 127 KVDYKLGSKYGCACMKALGEVRPVINDTGEVAELPTFLLNNKVLNNTLKELEDIKAS--T 184
Query: 380 ANRQTDLTVYLVRLLEKCYKD 442
R + ++ Y +LL+ Y +
Sbjct: 185 GGRNSFISKYKYQLLKNGYDE 205
>UniRef50_Q9SP08 Cluster: Exonuclease RRP41; n=5; Magnoliophyta|Rep:
Exonuclease RRP41 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 241
Score = 33.5 bits (73), Expect = 7.2
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +2
Query: 164 QGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEV--TCEVAQPKQIRPNE- 325
+G RLDGR FNE R++ G G + +G TK+++ V E+ Q + N+
Sbjct: 7 EGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDH 66
Query: 326 GIIFINVELNPMAA----PQFEANRQTDLTVYLVRLLEKC 433
++ + + Q R T+L++ + + +E C
Sbjct: 67 AVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEAC 106
>UniRef50_Q9UNA0 Cluster: ADAMTS-5 precursor; n=20;
Euteleostomi|Rep: ADAMTS-5 precursor - Homo sapiens
(Human)
Length = 930
Score = 33.5 bits (73), Expect = 7.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 89 SAPITKCVXTCXSNCXKHFIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCC 244
SA IT+ + NC +K + L G+ ++ T++ +++FG EY C
Sbjct: 457 SATITEFLDDGHGNCLLDLPRKQILGPEELPGQTYDATQQCNLTFGPEYSVC 508
>UniRef50_Q6F498 Cluster: Putative transcriptional regulator,
similar to LAL subfamily; n=1; Streptomyces griseus|Rep:
Putative transcriptional regulator, similar to LAL
subfamily - Streptomyces griseus
Length = 953
Score = 33.1 bits (72), Expect = 9.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 500 LRINIKVLNHDGNLTECASIATLASIAHFRRPDFTRDGDRVIIHTLTEKDPIPPVL 667
L + + L H GN E T+ S+ D +RDG R + + +DP P V+
Sbjct: 183 LCVAVTALVHHGNAPEAEHFITMPSMPAICLDDLSRDGVRDLFSAVFNRDPDPDVV 238
>UniRef50_Q95QG7 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 277
Score = 33.1 bits (72), Expect = 9.5
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Frame = +2
Query: 143 FIQKLVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPN 322
+ + +G DGR + +KL G E G S+ T+ ++ V+C + + +
Sbjct: 14 YFATFIKEGVYPDGRGLLDEQKLVFKQG-ECGGVGSSVVSTQGVT-VSCSIQASVSLVSD 71
Query: 323 EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCY---KDSKCIDLESLCIVVEXKV 493
++ I +E + + E + + +V L C+ ++ +C+D+ + +E
Sbjct: 72 APLVDIKIEGSQQLS---EKDAEDCNSVLLSLFTNNCFVRRENLRCLDVCGKPLPLE--- 125
Query: 494 WSLRINIKVLNHDGNLTECASIATLASIAHFRRP 595
W L I +KVL+ +GN + A A A++ + P
Sbjct: 126 WQLHIIVKVLSLEGNFLDAAVCALGAALVDAKLP 159
>UniRef50_Q24GF7 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: 3' exoribonuclease family, domain 1
containing protein - Tetrahymena thermophila SB210
Length = 270
Score = 33.1 bits (72), Expect = 9.5
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Frame = +2
Query: 173 RLDGRNFNETRKLDISFGS---EYGCCIVSLGETK--ILSEVTCEVAQPKQIRPNEGIIF 337
R DGR +++R+ I G G +SL + I + + E+ + +EG I
Sbjct: 22 RGDGRKNDQSREYLIQTGQLKQANGSSFISLNDNSVNIYTGIKVEIGETDN---DEGKII 78
Query: 338 INVELNPMAAPQFEA----NRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVWSLR 505
+ +E + N + +YL LL K + C +SLCIV + K W L
Sbjct: 79 LKIESAQRTEQNRDQENHINSDKNTLIYLEALLNKYLIQNIC--KKSLCIVEKKKCWILN 136
Query: 506 INIKVL 523
I++ +L
Sbjct: 137 IDVFIL 142
>UniRef50_Q6L223 Cluster: Ribonuclease PH; n=2;
Thermoplasmatales|Rep: Ribonuclease PH - Picrophilus
torridus
Length = 239
Score = 33.1 bits (72), Expect = 9.5
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Frame = +2
Query: 152 KLVSQ-GHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRP 319
KL++ G RLDGR FNE R + I+ G + G + G KI+ V A PK +
Sbjct: 5 KLINDDGLRLDGRAFNEMRPIRITTGVVDNADGSAYIEWGANKIVVAVYVREAYPKHAQN 64
Query: 320 -NEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEXKVW 496
++ I+ + + + + T+ + +L+ + LES +V
Sbjct: 65 IDKAIVKARYNMAGFSVEERKRPGPDRRTMEISKLISEA--------LESAIMVERLPRA 116
Query: 497 SLRINIKVLNHDGNLTECASIATLASIA 580
+ + I+VL D T AS+ T AS+A
Sbjct: 117 EIDVYIEVLEADAG-TRIASL-TAASVA 142
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,562,102
Number of Sequences: 1657284
Number of extensions: 13695147
Number of successful extensions: 29650
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 28764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29607
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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