Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C13
         (875 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    27   0.26 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           26   0.34 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 188 NFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 304
           N  + RK  ++ GSEY   IVSLGE K ++   CE  +P
Sbjct: 847 NLYDARKPYVN-GSEYHPSIVSLGEYKCVT-CKCENGKP 883


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 647 DPIPPVLYHYPVCTTFALYSNDILLSDPN 733
           +P PP  Y Y +    AL  +D +LSDP+
Sbjct: 144 NPTPPPHYTYQIIPYEALNVDDHILSDPS 172


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -2

Query: 334 YDAFIWSNLFWLSYF 290
           Y+AF+W+ +  ++Y+
Sbjct: 127 YEAFVWTRIMGVAYY 141


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +3

Query: 654 YHQFCIIILCVXH-LHCTVMISYSPILI 734
           YH FC  I+   H L C   I ++  L+
Sbjct: 167 YHFFCAFIIFTMHLLFCCAFIFFNMHLL 194


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -2

Query: 193 KISTVQTMSLRYELLYEMLXTIRXTSXNAFCYWCRFFC 80
           K+  +    L   LLY++L  I+      F +  RF C
Sbjct: 44  KMPLLPKTPLPLTLLYKLLGIIQFPISAHFSFMSRFLC 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,547
Number of Sequences: 336
Number of extensions: 4019
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)