Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C10
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 187 PHGSTFRLGADSGRFSQCCSRPPCEQR 267
           P+G T   G D G +   CS  PCE +
Sbjct: 88  PYGYT---GKDCGEYVDWCSTNPCENQ 111


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +3

Query: 300 RLETLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFT 479
           +L  L       KD ++   D++   P+   + +  G   V G+ EEK  ++  +    T
Sbjct: 71  KLTPLNEQFDVIKDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTT 130

Query: 480 RRYA 491
           RR A
Sbjct: 131 RRLA 134


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 159 LITKLSVLVASWINISAWG*LRKIFSVL 242
           ++  LSV+ +S+++I+ W  L K F  +
Sbjct: 484 VLNLLSVIKSSFLDINTWKMLVKSFDAI 511


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 555 RQHTILKTAGTPQIQPYSPPAK 490
           RQH +   +  PQ QP  P  K
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYK 198


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 555 RQHTILKTAGTPQIQPYSPPAK 490
           RQH +   +  PQ QP  P  K
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYK 198


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 555 RQHTILKTAGTPQIQPYSPPAK 490
           RQH +   +  PQ QP  P  K
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYK 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,094
Number of Sequences: 336
Number of extensions: 3825
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)