Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_C10
(861 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0636 + 23852985-23853142,23853253-23853445,23853910-238540... 33 0.29
03_02_0478 + 8775892-8776377 33 0.39
03_02_0485 - 8808139-8808618 32 0.51
03_02_0484 + 8805053-8805538 32 0.68
03_02_0483 - 8804021-8804485 32 0.68
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.89
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 31 1.2
01_01_0229 - 1943473-1943922 31 1.6
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 30 2.1
01_01_0231 + 1951047-1951499 30 2.1
07_01_1102 - 10129913-10130025,10130558-10130650,10130824-101309... 30 2.7
07_01_1127 + 10456895-10457388,10457488-10458112 29 4.8
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 29 4.8
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 29 6.3
09_03_0036 + 11772940-11773171,11774995-11775104 29 6.3
04_01_0252 - 3329712-3331061 29 6.3
03_02_1003 - 13127251-13128468 28 8.3
03_01_0491 + 3720842-3720958,3721904-3723109 28 8.3
02_02_0489 + 10869482-10871218 28 8.3
>01_05_0636 +
23852985-23853142,23853253-23853445,23853910-23854033,
23854285-23854637,23855525-23856530,23856892-23857085,
23857238-23857324
Length = 704
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 349 WNLSLSLLMLEPKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAEMLIHEATR 179
W L+L L+ + K S+V P+ + S S K+F + P ++ IH A +
Sbjct: 647 WRLTLPALLSQDKRIDEDSQVEPQISLLSEEDDPVTSVRKLFMTPPSKKLRIHRAEK 703
>03_02_0478 + 8775892-8776377
Length = 161
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 360 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 515
DV EE+ V+ DG I+ + G+ EEK DQ + R +F RR+ LP+ E
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 516 SVESRLSS 539
+++ + +
Sbjct: 130 QIKASMEN 137
>03_02_0485 - 8808139-8808618
Length = 159
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 360 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 515
DV EE+ V+ DG I+ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 516 SVESRLSS 539
+++ + +
Sbjct: 128 QIKASMEN 135
>03_02_0484 + 8805053-8805538
Length = 161
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 360 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 515
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 516 SVESRLSS 539
+++ + +
Sbjct: 130 QIKASMEN 137
>03_02_0483 - 8804021-8804485
Length = 154
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 360 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 515
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 516 SVESRLSS 539
+++ + +
Sbjct: 123 QIKASMEN 130
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 435 RVCLQPRCSRPPF*QRFLPGRNAGR 361
R CLQPR SRPP ++F GR+ R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 360 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 515
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 516 SVESRLSS 539
V++ L +
Sbjct: 119 QVKAGLEN 126
>01_01_0229 - 1943473-1943922
Length = 149
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 360 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 515
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 516 SVESRLSS 539
V++ + +
Sbjct: 118 QVKASMEN 125
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +3
Query: 321 SIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 500
S+K D D F +DVQ F P S+ G +K D+ G TR++ E
Sbjct: 404 SLKDDMDVFSPLVDVQPFTPSSGSLWDDHG-----SDETKKDDKLGEKKLSTTRKFPFIE 458
Query: 501 GCTAESVESRLSSEWCVVCNRTQEGAASS 587
++ E S+W + N Q+ A+S+
Sbjct: 459 ----DNNEPHPISDWKSISNSRQDDASSA 483
>01_01_0231 + 1951047-1951499
Length = 150
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3
Query: 360 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 515
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 516 SVESRLSS 539
V++ + +
Sbjct: 119 QVKAGMEN 126
>07_01_1102 -
10129913-10130025,10130558-10130650,10130824-10130931,
10131136-10131237,10132064-10132103
Length = 151
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -2
Query: 476 ELTRYVTMLIFLLLVFAFNHDVAVRRFNRDFFRGEMLDVQVYLE----LILVTFDAGAQG 309
E V++LI L+++FA + + FNR ++ ++V ++ +I D GA G
Sbjct: 15 EAPNSVSLLIVLIILFAPENPTIWKEFNRKESTRQLELLRVGIKNGGMVISDRVDGGASG 74
Query: 308 LEPRQQGDATGGSILC 261
PR QG A+G C
Sbjct: 75 SSPR-QGGASGVKTEC 89
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 435 RVCLQPRCSRPPF*QRFLPGRNAGR 361
R CLQPR SRPP ++F R+ R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Frame = +3
Query: 324 IKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ------HGYISRQ---- 473
+ D + ++ D+ + EE+ V D +V+ G+H++++ + G+ +
Sbjct: 137 VMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSS 196
Query: 474 FTRRYALPEGCTAESVESRLSS 539
+ R ALP+ C V + L +
Sbjct: 197 YDMRLALPDECDKSKVRAELKN 218
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 382 KKSLLKRRTATSWLKANTRRRKISMVTYRVNS 477
KKS T TS K TRRRK+++V Y S
Sbjct: 16 KKSAAGELTTTSEKKKKTRRRKVAVVYYLCRS 47
>09_03_0036 + 11772940-11773171,11774995-11775104
Length = 113
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 380 GRNLC*NGGRLHRG*RQTRGEERSAWLH 463
G+NL G+ H G R+ RG+ER LH
Sbjct: 21 GQNLMDRRGKRHEGRRERRGKERGRNLH 48
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 435 RVCLQPRCSRPPF*QRFLPGRNAGR 361
R CLQPR +RPP ++F R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430
>03_02_1003 - 13127251-13128468
Length = 405
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 473 IHSSLRFAGGLYG*ICGVPAVFRMVCCL*SHPGRCRQQWRVNAR 604
+ S + AG L + + VCCL S G R WRV+ R
Sbjct: 128 VFSDVTDAGALRADLSPHGPIHAAVCCLASRGGGVRDSWRVDYR 171
>03_01_0491 + 3720842-3720958,3721904-3723109
Length = 440
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 262 AHKGAGCSTEKIFRSQPQAEMLIHEATRTLNFV 164
A G GC K+F S+ +A+ H A +L F+
Sbjct: 391 ADHGRGCKLAKVFESKDEAKASTHTAISSLPFM 423
>02_02_0489 + 10869482-10871218
Length = 578
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 309 TLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGK-HEEKKDQHGYISRQFTRR 485
TL S K D +++ D P+E + T +G I+ G+ H+EK D+ + R
Sbjct: 443 TLVGSKKGKADNGKLDGDTHSVMPKEATAGTQNGGILTGGENHKEKVDKDANVP-SIRRE 501
Query: 486 YA 491
YA
Sbjct: 502 YA 503
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,035,957
Number of Sequences: 37544
Number of extensions: 513405
Number of successful extensions: 1549
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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