Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C09
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    27   0.20 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    27   0.20 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   4.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   7.3  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   7.3  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   7.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   7.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.7  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = -3

Query: 740 LPQLCGGPAGKCPHFQFKVHQSAGTEVGRR---TFDRQGLSIRPVDRCA 603
           +P  C G A  CP     V +    E+ RR   TFD        VD C+
Sbjct: 337 MPHKCNGNAHNCPSRSHPVWEIVMNELDRRDDPTFDESLPGCHMVDSCS 385


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
 Frame = -3

Query: 740 LPQLCGGPAGKCPHFQFKVHQSAGTEVGRR---TFDRQGLSIRPVDRCA 603
           +P  C G A  CP     V +    E+ RR   TFD        VD C+
Sbjct: 344 MPHKCNGNAHNCPSRSHPVWEIVMNELDRRDDPTFDESLPGCHMVDSCS 392


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 463 SPTSTGTCICTSLCFTKAF 407
           S TS G   C SL F KAF
Sbjct: 66  SLTSFGYLFCASLSFYKAF 84


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 718 PPANAPTSSSKSISLQGP 665
           PPA  PT+SS S +L+ P
Sbjct: 215 PPAEFPTTSSSS-ALESP 231


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 718 PPANAPTSSSKSISLQGP 665
           PPA  PT+SS S +L+ P
Sbjct: 4   PPAEFPTTSSSS-ALESP 20


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 718 PPANAPTSSSKSISLQGP 665
           PPA  PT+SS S +L+ P
Sbjct: 4   PPAEFPTTSSSS-ALESP 20


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 718 PPANAPTSSSKSISLQGP 665
           PPA  PT+SS S +L+ P
Sbjct: 215 PPAEFPTTSSSS-ALESP 231


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 587 FYSDLWHTYPQALWTDLACRRCG 655
           FYS L + YP     +   R+CG
Sbjct: 249 FYSHLSNPYPSEEAKEELARKCG 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,524
Number of Sequences: 336
Number of extensions: 5469
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)