Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_C09
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-6|AAK39259.1| 418|Caenorhabditis elegans Hypothetical pr... 338 4e-93
U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical pr... 33 0.36
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 31 1.1
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 30 1.9
AF016668-6|AAB66090.1| 275|Caenorhabditis elegans Hypothetical ... 30 1.9
U23523-3|AAC46558.2| 152|Caenorhabditis elegans Hypothetical pr... 29 5.8
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 29 5.8
>U39852-6|AAK39259.1| 418|Caenorhabditis elegans Hypothetical
protein K10C2.4 protein.
Length = 418
Score = 338 bits (830), Expect = 4e-93
Identities = 155/263 (58%), Positives = 192/263 (73%)
Frame = +3
Query: 93 MKSFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWILDLNIISHLFDGPLLKGKQ 272
MKSF+ +SDFPI+NLPYGVF++ ++ +HIGVAIG+ IL+L I++LFDGP LK Q
Sbjct: 1 MKSFVSVPQNSDFPIQNLPYGVFSTKADSSRHIGVAIGDQILNLAEIANLFDGPQLKAHQ 60
Query: 273 NVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQRDVQMHVPV 452
+VFK+ LNAFMAL +P W+EAR +Q+LL L++NA LR +A V Q D MH+P
Sbjct: 61 DVFKQSTLNAFMALPRPAWLEARARIQQLLSEDCAVLRDNAHLRSRALVAQSDATMHLPA 120
Query: 453 EVGDYTDFYSSLQHATNVGIMFRGKEAALFENWKHLPVGYHGRSSSIVISGTPIHRPYGQ 632
++GDYTDFYSS+ HATNVGIMFRGKE AL NWK LPVGYHGR+SSIV+SGT + RP GQ
Sbjct: 121 QIGDYTDFYSSIHHATNVGIMFRGKENALMPNWKWLPVGYHGRASSIVVSGTDLKRPVGQ 180
Query: 633 TLPVEGAAPHFGPCRLMDFELEVGAFAGGPPTQLGERVCAKDAEDKIFGFVLLNDWSARD 812
T + P FGP +LMDFELE+ F GGP +LG RV + AED+IFG VL+NDWSARD
Sbjct: 181 TKAPDAEVPSFGPSKLMDFELEMAFFVGGPENELGTRVPIEKAEDRIFGVVLMNDWSARD 240
Query: 813 IXKWEXIPLGXVXGXKPGXTISP 881
I WE +PLG T+SP
Sbjct: 241 IQAWEYVPLGPFLAKSFATTVSP 263
>U97403-6|AAB52471.2| 583|Caenorhabditis elegans Hypothetical
protein T10E9.3 protein.
Length = 583
Score = 32.7 bits (71), Expect = 0.36
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
Frame = +3
Query: 72 CVKS*RKMKSFIEYSSDSDFPIENLPYGVFTSDKNAQKHIGVAIGEWILDLNIISHLFDG 251
C K+ IE+ D D + + VF + K + + +GE + DLN+I +
Sbjct: 198 CSTGGEDQKNRIEWKVDGDL----IYFSVFQNAKKGRWWTAIGVGESMNDLNMILLFAEN 253
Query: 252 PLLKGKQNVFKEEKLNAFMALTKPHWIEARETLQKLLDVSSPALQNNAELREKAFVKQRD 431
LK KQ +FK E L + E E + L V++ + + +K F+ + D
Sbjct: 254 GRLK-KQGIFKTE--GKMQPLEVEY--EGIEVKKDLAIVNNGKANFDVSVEKKFFLDRAD 308
Query: 432 VQ----MHVPVEVGDY 467
Q M V + G Y
Sbjct: 309 EQGCFTMQVAILAGQY 324
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 342 ETLQKLLDVSSPALQNNA-ELREKAFVKQRDVQMHVPVEVGDYTDFYSSLQHATNVGIMF 518
E ++KL +V A NN EK ++ D ++ +GD T+ S+++ VG
Sbjct: 117 ELIKKLKEVRQSAAANNEISPMEKRALEWEDYRLRSEF-IGDVTNLTGSVEYFNAVGNFQ 175
Query: 519 RGKEAALFENWKHLPVGYHGRSSSIVIS 602
R ++LFE+ G++ +SI+ S
Sbjct: 176 RDFNSSLFESTAEKFDGFNEHITSILKS 203
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -1
Query: 811 SRALQSFKSTKPKILSSASLAQTLSPSCVGGPPANAPTSSSKSISLQGPKWG-AAPSTGK 635
S L FKS++P++L+ AS++ +PS P + + T ++ S S G STG+
Sbjct: 189 SNGLVRFKSSQPRVLNPASISLN-APSSSFNPQSTSSTPATSSSSSSSTNGGFVKSSTGE 247
>AF016668-6|AAB66090.1| 275|Caenorhabditis elegans Hypothetical
protein F36H9.2 protein.
Length = 275
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -1
Query: 448 GTCICTSLCFTKAFSRSSALFCNAGLETSSNFCKVSLASIQ*GLVSAINAFNFSSLNTFC 269
G C TS C T S + + L T ++ + + GLVS + + + +++TF
Sbjct: 32 GFCETTSYCMTSWVSINGQITAQDCLTTRTDLSDRQCQTNRKGLVSCVCSTDMCNVDTFS 91
Query: 268 LP----LSSGPSNKC 236
+P L++ P+ KC
Sbjct: 92 IPTDIVLTAPPTIKC 106
>U23523-3|AAC46558.2| 152|Caenorhabditis elegans Hypothetical
protein F53A9.3 protein.
Length = 152
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 516 FRGKEAALFENWKHLPVGYHGRSSSIVISGTPIHRPYGQTLPVEGAAPHF 665
FR +E ++ WK + Y+ +S IS + R L VEG PHF
Sbjct: 15 FRDEEKGIYAQWK-IKGFYYRKSGLPKISIKGVARVRYSQLEVEGKLPHF 63
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 258 LKGKQNVFKEEKLNAFMALTKPH-WIEARETLQKLLDVSSPALQNNAELREKAFVKQRDV 434
L+ ++ EK N + + K H W E RE + L+DV S L+ E+ E+ +++
Sbjct: 278 LEAREICINSEK-NVPVIIEKIHQWTEVREVIIDLIDVESENLRKLKEMEEQLDFMMKEM 336
Query: 435 Q 437
+
Sbjct: 337 E 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,874,437
Number of Sequences: 27780
Number of extensions: 530681
Number of successful extensions: 1514
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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