Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C06
         (864 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089542-1|AAL90280.1|  613|Drosophila melanogaster LD19191p pro...    30   4.7  
AY058718-1|AAL13947.1|  423|Drosophila melanogaster LD45950p pro...    30   4.7  
AF426831-1|AAL28078.1|  613|Drosophila melanogaster AFX protein.       30   4.7  
AE014297-1790|AAS65148.1|  613|Drosophila melanogaster CG3143-PC...    30   4.7  
AE014297-1789|AAS65147.1|  613|Drosophila melanogaster CG3143-PB...    30   4.7  
AE014297-1788|AAF55012.2|  798|Drosophila melanogaster CG3143-PA...    30   4.7  

>AY089542-1|AAL90280.1|  613|Drosophila melanogaster LD19191p
           protein.
          Length = 613

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 138 LPGTCLIPLGHEPSTVRDPHLKN-SIGNLRCNLQNL 34
           L G CL  L +E   + + +L+N  +GNL CN++ L
Sbjct: 446 LEGQCLEVLNNEAQPIDEFNLENFPVGNLECNVEEL 481


>AY058718-1|AAL13947.1|  423|Drosophila melanogaster LD45950p
           protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 138 LPGTCLIPLGHEPSTVRDPHLKN-SIGNLRCNLQNL 34
           L G CL  L +E   + + +L+N  +GNL CN++ L
Sbjct: 256 LEGQCLEVLNNEAQPIDEFNLENFPVGNLECNVEEL 291


>AF426831-1|AAL28078.1|  613|Drosophila melanogaster AFX protein.
          Length = 613

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 138 LPGTCLIPLGHEPSTVRDPHLKN-SIGNLRCNLQNL 34
           L G CL  L +E   + + +L+N  +GNL CN++ L
Sbjct: 446 LEGQCLEVLNNEAQPIDEFNLENFPVGNLECNVEEL 481


>AE014297-1790|AAS65148.1|  613|Drosophila melanogaster CG3143-PC,
           isoform C protein.
          Length = 613

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 138 LPGTCLIPLGHEPSTVRDPHLKN-SIGNLRCNLQNL 34
           L G CL  L +E   + + +L+N  +GNL CN++ L
Sbjct: 446 LEGQCLEVLNNEAQPIDEFNLENFPVGNLECNVEEL 481


>AE014297-1789|AAS65147.1|  613|Drosophila melanogaster CG3143-PB,
           isoform B protein.
          Length = 613

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 138 LPGTCLIPLGHEPSTVRDPHLKN-SIGNLRCNLQNL 34
           L G CL  L +E   + + +L+N  +GNL CN++ L
Sbjct: 446 LEGQCLEVLNNEAQPIDEFNLENFPVGNLECNVEEL 481


>AE014297-1788|AAF55012.2|  798|Drosophila melanogaster CG3143-PA,
           isoform A protein.
          Length = 798

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 138 LPGTCLIPLGHEPSTVRDPHLKN-SIGNLRCNLQNL 34
           L G CL  L +E   + + +L+N  +GNL CN++ L
Sbjct: 631 LEGQCLEVLNNEAQPIDEFNLENFPVGNLECNVEEL 666


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,199,746
Number of Sequences: 53049
Number of extensions: 442252
Number of successful extensions: 1060
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)