Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C04
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   1.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   7.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   7.4  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 307 PGCWSTSSITATSNKIITKKYVVYSVLSK 393
           PGC+S     A  +K + KKY   S  +K
Sbjct: 228 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 256


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 307 PGCWSTSSITATSNKIITKKYVVYSVLSK 393
           PGC+S     A  +K + KKY   S  +K
Sbjct: 542 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 570


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 307 PGCWSTSSITATSNKIITKKYVVYSVLSK 393
           PGC+S     A  +K + KKY   S  +K
Sbjct: 775 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 803


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 307 PGCWSTSSITATSNKIITKKYVVYSVLSK 393
           PGC+S     A  +K + KKY   S  +K
Sbjct: 775 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 803


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 219 ITLMFLCWATFLKIWLL 169
           +T    CW++FLKI +L
Sbjct: 544 VTYQLYCWSSFLKISVL 560


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 538 KKCFICEICDAIALFVTIISCNKQVN 615
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 561 NFTNKAFFSLH 529
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 561 NFTNKAFFSLH 529
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 571 IALFVTIISCNKQVNNNNCIHFMFQ 645
           +A+F+    C++    +NC+   FQ
Sbjct: 327 LAIFILYFICDEAHYASNCLRVQFQ 351


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 213 LMFLCWATFLKIWLLARSKFTNSKHFVLVQLF 118
           L  LC+    K+  +  + F N+ +F++ Q+F
Sbjct: 274 LCHLCFLLDEKLSYIILTSFLNNFYFIIFQVF 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,316
Number of Sequences: 336
Number of extensions: 3394
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)