Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C03
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.2  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   9.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.7  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 413 KLSLLDCQALDQQTDYKGKPECGD 342
           KLS  + + +D++    GKP+C D
Sbjct: 113 KLSCGNGECIDKELFCNGKPDCKD 136


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 413 KLSLLDCQALDQQTDYKGKPECGD 342
           KLS  + + +D++    GKP+C D
Sbjct: 120 KLSCGNGECIDKELFCNGKPDCKD 143


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 871 HYTVKLRHLRLQKF 830
           H+ +KL+HL   KF
Sbjct: 106 HHEIKLQHLHQSKF 119


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 341 LCSLRIVHRAHSIVCNCSQ 285
           L  L IVH  H+ +CN  Q
Sbjct: 208 LALLDIVHGVHNELCNLCQ 226


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 807 RHIPGCSQNFCNL 845
           RH P CS  F N+
Sbjct: 358 RHPPDCSMEFANM 370


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,019
Number of Sequences: 336
Number of extensions: 4230
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)