Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_C03
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 161 6e-40
Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical pr... 157 7e-39
AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical ... 122 3e-28
U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical pr... 116 3e-26
Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical pr... 76 4e-14
AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical ... 71 1e-12
AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical ... 59 4e-09
AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical ... 52 5e-07
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 29 5.8
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 161 bits (391), Expect = 6e-40
Identities = 80/150 (53%), Positives = 102/150 (68%), Gaps = 2/150 (1%)
Frame = +2
Query: 197 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 376
KN G+DV L YKG V IIVNVASQCGLT NY QL EL + Y + GL +LAFPCNQF
Sbjct: 10 KNANGDDVSLSDYKGKVLIIVNVASQCGLTNKNYTQLKELLDVY-KKDGLEVLAFPCNQF 68
Query: 377 AGQEPGNPEEIVCFASERKVKFD--LFEKVDVNGDNASPLWKY*SISKEAPLGSFIKWNF 550
AGQEP +I F ++ K KF+ LF+K+DVNGD SPL+K+ K + IKWNF
Sbjct: 69 AGQEPSCEIDIQAFVAD-KFKFEPTLFQKIDVNGDKQSPLFKFLKNEKGGFMFDAIKWNF 127
Query: 551 TKFIINKDGVPVERHGPNTDPLDLVKSLEK 640
TKF++ +DG ++R GP TDP D+ K +++
Sbjct: 128 TKFLVGRDGKIIKRFGPTTDPKDMEKDIKE 157
>Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical
protein R05H10.5 protein.
Length = 163
Score = 157 bits (382), Expect = 7e-39
Identities = 77/149 (51%), Positives = 100/149 (67%), Gaps = 2/149 (1%)
Frame = +2
Query: 197 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 376
KN +GED L Y+G V IIVNVASQCGLT +NY Q EL + Y + GL +LAFPCNQF
Sbjct: 10 KNAQGEDTPLSNYQGKVLIIVNVASQCGLTNSNYNQFKELLDVY-KKDGLEVLAFPCNQF 68
Query: 377 AGQEPGNPEEIVCFASERKVKFD--LFEKVDVNGDNASPLWKY*SISKEAPLGSFIKWNF 550
GQEP +I F ++ K KF+ LF+K+DVNGDN +PL+K+ K L IKWNF
Sbjct: 69 GGQEPSCEIDIAAFVAD-KFKFEPTLFQKIDVNGDNTAPLYKFLKQEKGGFLVDAIKWNF 127
Query: 551 TKFIINKDGVPVERHGPNTDPLDLVKSLE 637
TKF++ +DG ++R P T+P D+ K +E
Sbjct: 128 TKFLVGRDGHVIKRFSPTTEPKDMKKDIE 156
>AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical
protein T09A12.2b protein.
Length = 188
Score = 122 bits (295), Expect = 3e-28
Identities = 60/149 (40%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Frame = +2
Query: 197 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 376
KNI G+ V ++ Y+ V + NVAS CG T +NY EL Y E KG R+ AFPCNQF
Sbjct: 37 KNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYRE-KGFRVAAFPCNQF 95
Query: 377 AGQEPGNPEEIVCFA-SERKVKFDLFEKVDVNGDNASPLWKY*SISKEAPLGSFIKWNFT 553
QEP +I+ F S D++ K++VNG N PLWK+ + + L + I WNF+
Sbjct: 96 EKQEPETEGKILDFVKSSYTYAPDMYSKIEVNGQNTHPLWKFLKKERGSSLSADIPWNFS 155
Query: 554 KFIINKDGVPVERHGPNTDPLDLVKSLEK 640
KF+++K+G V R+ + +P+DL + + +
Sbjct: 156 KFLVDKNGHVVGRYSHSVNPIDLEEEISR 184
>U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical
protein R03G5.5 protein.
Length = 193
Score = 116 bits (278), Expect = 3e-26
Identities = 71/159 (44%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Frame = +2
Query: 209 GEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQFAGQE 388
G+ V LD Y G V IIVNVAS CGLT +NYK+L L ++Y +GLR+ AFPCNQF Q
Sbjct: 43 GDLVSLDKYSGLVVIIVNVASYCGLTNSNYKELKSLNDKY-HLRGLRVAAFPCNQFGFQA 101
Query: 389 PGNPEEIVCFASER-KVKFDLFEKVDVNG----DNASPLWKY*SISKEAPLGSFIKWNFT 553
+I F +E+ + DL+ KV VNG PLW + + L IKWNFT
Sbjct: 102 C----DINKFVNEKFSFEPDLYGKVTVNGGPLIGEEEPLWTFLKKEQGGTLFDAIKWNFT 157
Query: 554 KFIINKDGVPVERHGPNTDPLDLVKSLEKYW*KILAQTK 670
KF++N+ G V R GP+T+P KS E+ K+L + K
Sbjct: 158 KFLVNRQGKVVARFGPSTNP----KSFEEEIVKLLDENK 192
>Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical
protein C11E4.2 protein.
Length = 224
Score = 77.0 bits (181), Expect = 2e-14
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 23/158 (14%)
Frame = +2
Query: 197 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 376
+ ++GE L Y+G V ++VNVA+ C T Y N + E+Y +++GL ++AFPCNQF
Sbjct: 47 ETLQGEYTDLSQYRGKVILLVNVATFCAYT-QQYTDFNPMLEKY-QAQGLTLVAFPCNQF 104
Query: 377 AGQEPGNPEEIVCFASERK--------VKFDLFEKVDVNGDNASPLWKY---------*S 505
QEP E++ + + + ++ K+DVNGDN PL+++
Sbjct: 105 YLQEPAENHELMNGLTYVRPGNGWTPHQELHIYGKIDVNGDNHHPLYEFVKESCPQTVDK 164
Query: 506 ISKEAPL------GSFIKWNFTKFIINKDGVPVERHGP 601
I K L S I WNF KF+I+++G P R P
Sbjct: 165 IGKTDELMYNPVRPSDITWNFEKFLIDRNGQPRFRFHP 202
>Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical
protein C11E4.1 protein.
Length = 223
Score = 75.8 bits (178), Expect = 4e-14
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Frame = +2
Query: 197 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 376
+ ++GE L Y+G V ++VNVA+ C T Y N L E+Y +S+G ++AFPCNQF
Sbjct: 46 ETLQGEYTDLSQYRGQVLLMVNVATFCAYT-QQYTDFNPLIEKY-QSQGFTLIAFPCNQF 103
Query: 377 AGQEPGNPEEI---VCFAS-----ERKVKFDLFEKVDVNGDNASPLWKY---------*S 505
QEP E+ + + + ++ K+D NGDN P++++
Sbjct: 104 YLQEPAENHELMNGIMYVRPGNGWKPHQNLHIYGKLDTNGDNQHPIYEFVKESCPQTVDK 163
Query: 506 ISKEAPL------GSFIKWNFTKFIINKDGVPVERHGP 601
I K L S I WNF KF+I+++G P R P
Sbjct: 164 IGKTDELMYNPIRASDITWNFEKFLIDRNGQPRFRFHP 201
>AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical
protein T09A12.2a protein.
Length = 125
Score = 70.9 bits (166), Expect = 1e-12
Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +2
Query: 197 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 376
KNI G+ V ++ Y+ V + NVAS CG T +NY EL Y E KG R+ AFPCNQF
Sbjct: 37 KNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYRE-KGFRVAAFPCNQF 95
Query: 377 AGQEPGNPEEIVCFA-SERKVKFDLFEKV 460
QEP +I+ F S D++ KV
Sbjct: 96 EKQEPETEGKILDFVKSSYTYAPDMYSKV 124
>AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical
protein Y94H6A.4 protein.
Length = 126
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/72 (40%), Positives = 43/72 (59%)
Frame = +2
Query: 197 KNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRILAFPCNQF 376
+ +KG+ L Y+G V ++VNVA+ C T Y N + ++Y + +GL I AFPCNQF
Sbjct: 46 ETLKGDYTDLSQYRGKVTLLVNVATFCAYT-QQYTDFNPILDKY-QKQGLVIAAFPCNQF 103
Query: 377 AGQEPGNPEEIV 412
QEP E++
Sbjct: 104 YLQEPAENHELL 115
>AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical
protein F55A3.5 protein.
Length = 145
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Frame = +2
Query: 350 ILAFPCNQFAGQEPGNPEEIVCFASERKVKFDLFEKVDVNGDNASPLWKY*SISKEAPLG 529
IL FPCNQ +E ++ F K + +++K+DVNG N PL+K LG
Sbjct: 33 ILVFPCNQSNNEESSWESDLPYFF---KYQPKIYQKIDVNGVNTDPLYKLLKKVNVVTLG 89
Query: 530 SFIK-------WNFTKFIINKDGVPVERHGPNTDPLD 619
I +NFTKF + KDG ++R T P D
Sbjct: 90 DSIGILGDSICYNFTKFFVGKDGHVIKRFCRTTLPKD 126
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical
protein C41A3.1 protein.
Length = 7829
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 242 HVCIIVNVASQCGLTAN-NYKQLNELYEQYGESKGLRILAFPCNQFAGQEPGNPEEIVCF 418
+ C I+ + L +Y + N L+ + L++ QF Q E+I+
Sbjct: 389 NACAIIEKPEKPSLVQKESYAESNVLFLSAKSHESLKLQIEEYTQFMAQSDSAMEDILYT 448
Query: 419 ASERKVKFD 445
+ERK K+D
Sbjct: 449 VNERKTKYD 457
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,667,011
Number of Sequences: 27780
Number of extensions: 381591
Number of successful extensions: 914
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -