Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C03
         (884 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   3.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   4.9  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   8.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.6  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   8.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 377 AGQEPGNPEEIVCFASERKVKFDLFEKVDVNGDNASPL-WKY*SISKEAPLGS 532
           AG + GN +            +D ++ ++ N +NA+ + W+Y    K  PLG+
Sbjct: 95  AGAQRGNEQRCTVTMHGTVQSYDKYDLLE-NVNNAARINWEYLDKYKPTPLGA 146


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 468 LTSTFSNKSNLTLRSEAKQTIS 403
           L  ++SN+ NL  + EAK  +S
Sbjct: 670 LFGSWSNRPNLLFKDEAKDLVS 691


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 468 LTSTFSNKSNLTLRSEAKQTIS 403
           L  ++SN+ NL  + EAK  +S
Sbjct: 670 LFGSWSNRPNLLFKDEAKDLVS 691


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 468 LTSTFSNKSNLTLRSEAKQTIS 403
           L  ++SN+ NL  + EAK  +S
Sbjct: 670 LFGSWSNRPNLLFKDEAKDLVS 691


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = +1

Query: 55  ISFRVIAKLATPIIGNVICLSRAQLSTVRMTSN 153
           ++FR++      +I N  C++  Q   ++ T+N
Sbjct: 396 VNFRILGANVKELIRNTHCVNNNQNDNIQNTNN 428


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 850 HLRLQKFWLXPGMCLHLYK 794
           HLR  K WL P    +L K
Sbjct: 221 HLRHTKIWLRPDWLFNLTK 239


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 226 GCLQRTCLYHCECCFS 273
           GC  +TC    +CCF+
Sbjct: 434 GCECKTCNSKTKCCFA 449


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 343 TFALSVLFIELIQLFVIVRSKAALRSNIHNDTNMS 239
           TFA  +LFI L+Q+ V V +   ++ N  N  N+S
Sbjct: 83  TFASFLLFILLVQIAVAVYAFIVVK-NDDNFRNIS 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,934
Number of Sequences: 438
Number of extensions: 4564
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)