Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C02
         (1022 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.54 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   6.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   8.7  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 152  KSPRRVQKKPPQSTSGIAQXPSAGHPSHPAINWYT 48
            K P  V   PPQ T+G+    S+    HP  +W T
Sbjct: 1005 KPPEPVTPAPPQVTTGVDTGASSTEHMHP--DWTT 1037


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 233 GSGGGANQRTAPQWMLPLLLG 295
           G GGG  Q TA +  L  LLG
Sbjct: 138 GKGGGVIQGTASEATLVALLG 158


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 572 DCCTHAVYXXXWL 534
           D CTH ++   WL
Sbjct: 114 DLCTHIIFAFGWL 126


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = -1

Query: 383 RAYDRELACVDSYRALQQAAGRSPAARRLGLEVKATSTEEQFFDLHHH 240
           R     L    S   + +A G     ++  L  K T T    +DLHH+
Sbjct: 50  RCIKESLRLYPSVHLISRALGEDVRTQKGYLIPKDTITIIHIYDLHHN 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,645
Number of Sequences: 336
Number of extensions: 2414
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29073354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)