Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_C02
         (1022 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0862 + 6714041-6714358,6714462-6714603,6715511-6715735,671...    30   2.6  
03_05_1070 + 30125131-30127029                                         29   7.9  

>01_01_0862 +
           6714041-6714358,6714462-6714603,6715511-6715735,
           6715769-6716763,6717327-6717381,6717469-6717621,
           6718130-6718299,6718388-6718870
          Length = 846

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 217 FYFRSRIRWWCKSKNCSSVDVAFTSRPSLLAAGERPAAC 333
           ++FR R  +WC  KN  SV V   S P++L     P  C
Sbjct: 53  WFFRLRRDFWCVCKNILSVGVPSFSWPAVLIDDALPINC 91


>03_05_1070 + 30125131-30127029
          Length = 632

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 416 VTALTVDSMFVRAYDRELACVDSYRALQQAAGRSPAA 306
           V  L +DSM  R  D E  C    RA+++  GRS AA
Sbjct: 540 VLRLDMDSMRNRVQDLERECSSMRRAIKKIDGRSAAA 576


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,708,442
Number of Sequences: 37544
Number of extensions: 347202
Number of successful extensions: 1059
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3001039372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)