Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_C02
(1022 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030423-1|ABO52843.1| 506|Drosophila melanogaster IP17710p pro... 30 4.5
BT023765-1|AAZ41773.1| 701|Drosophila melanogaster RE18252p pro... 30 4.5
AE014134-2732|AAN10947.1| 701|Drosophila melanogaster CG5953-PB... 30 4.5
AE014134-2731|AAF53541.2| 701|Drosophila melanogaster CG5953-PA... 30 4.5
BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p pro... 30 5.9
AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage sti... 30 5.9
AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA... 30 5.9
AY089243-1|AAL89981.1| 550|Drosophila melanogaster AT03107p pro... 29 7.8
AE014297-176|AAF52075.1| 550|Drosophila melanogaster CG14662-PA... 29 7.8
>BT030423-1|ABO52843.1| 506|Drosophila melanogaster IP17710p
protein.
Length = 506
Score = 30.3 bits (65), Expect = 4.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 224 SGPGSGGGANQRTA-PQWMLPLLLGRVFLQRASGRLPVAVRGTNQHTRVRGHRLERTSNR 400
+GPG GGG++ R A P+ R + S +P TN H + H L +
Sbjct: 187 AGPGGGGGSSSREANDPTSDPIKPDRTLSEAGSSPIP----NTNMHEAHKNHLLNSPAGG 242
Query: 401 RSV 409
RSV
Sbjct: 243 RSV 245
>BT023765-1|AAZ41773.1| 701|Drosophila melanogaster RE18252p
protein.
Length = 701
Score = 30.3 bits (65), Expect = 4.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 224 SGPGSGGGANQRTA-PQWMLPLLLGRVFLQRASGRLPVAVRGTNQHTRVRGHRLERTSNR 400
+GPG GGG++ R A P+ R + S +P TN H + H L +
Sbjct: 382 AGPGGGGGSSSREANDPTSDPIKPDRTLSEAGSSPIP----NTNMHEAHKNHLLNSPAGG 437
Query: 401 RSV 409
RSV
Sbjct: 438 RSV 440
>AE014134-2732|AAN10947.1| 701|Drosophila melanogaster CG5953-PB,
isoform B protein.
Length = 701
Score = 30.3 bits (65), Expect = 4.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 224 SGPGSGGGANQRTA-PQWMLPLLLGRVFLQRASGRLPVAVRGTNQHTRVRGHRLERTSNR 400
+GPG GGG++ R A P+ R + S +P TN H + H L +
Sbjct: 382 AGPGGGGGSSSREANDPTSDPIKPDRTLSEAGSSPIP----NTNMHEAHKNHLLNSPAGG 437
Query: 401 RSV 409
RSV
Sbjct: 438 RSV 440
>AE014134-2731|AAF53541.2| 701|Drosophila melanogaster CG5953-PA,
isoform A protein.
Length = 701
Score = 30.3 bits (65), Expect = 4.5
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 224 SGPGSGGGANQRTA-PQWMLPLLLGRVFLQRASGRLPVAVRGTNQHTRVRGHRLERTSNR 400
+GPG GGG++ R A P+ R + S +P TN H + H L +
Sbjct: 382 AGPGGGGGSSSREANDPTSDPIKPDRTLSEAGSSPIP----NTNMHEAHKNHLLNSPAGG 437
Query: 401 RSV 409
RSV
Sbjct: 438 RSV 440
>BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p
protein.
Length = 437
Score = 29.9 bits (64), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 146 PRRVQKKPPQSTSGIAQXPSAGHPSHP 66
PR + PPQ G+ Q P A +PS P
Sbjct: 294 PRARAQMPPQQQQGVPQAPPAPYPSDP 320
>AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage
stimulation factor 64kilodalton subunit protein.
Length = 419
Score = 29.9 bits (64), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 146 PRRVQKKPPQSTSGIAQXPSAGHPSHP 66
PR + PPQ G+ Q P A +PS P
Sbjct: 294 PRARAQMPPQQQQGVPQAPPAPYPSDP 320
>AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA
protein.
Length = 419
Score = 29.9 bits (64), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 146 PRRVQKKPPQSTSGIAQXPSAGHPSHP 66
PR + PPQ G+ Q P A +PS P
Sbjct: 294 PRARAQMPPQQQQGVPQAPPAPYPSDP 320
>AY089243-1|AAL89981.1| 550|Drosophila melanogaster AT03107p
protein.
Length = 550
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 453 RVVPXRLHANKRRSGSVSGLLDPAWEKQPXXXIHXMCATV 572
R+ P L NKRR + GL+ +EK P + AT+
Sbjct: 446 RLNPSWLRGNKRRESNTIGLIQGRFEKDPYEQVGGPIATI 485
>AE014297-176|AAF52075.1| 550|Drosophila melanogaster CG14662-PA
protein.
Length = 550
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 453 RVVPXRLHANKRRSGSVSGLLDPAWEKQPXXXIHXMCATV 572
R+ P L NKRR + GL+ +EK P + AT+
Sbjct: 446 RLNPSWLRGNKRRESNTIGLIQGRFEKDPYEQVGGPIATI 485
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,036,870
Number of Sequences: 53049
Number of extensions: 539173
Number of successful extensions: 1658
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1653
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5222196765
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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