Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B24
         (888 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113636-1|AAM29641.1|  336|Drosophila melanogaster RH73327p pro...   233   2e-61
AY070974-1|AAL48596.1|  336|Drosophila melanogaster RE07422p pro...   233   2e-61
AE013599-448|AAF59231.1|  336|Drosophila melanogaster CG1598-PA ...   233   2e-61
BT001458-1|AAN71213.1|  119|Drosophila melanogaster GM18141p pro...   100   5e-21

>AY113636-1|AAM29641.1|  336|Drosophila melanogaster RH73327p
           protein.
          Length = 336

 Score =  233 bits (571), Expect = 2e-61
 Identities = 110/143 (76%), Positives = 123/143 (86%)
 Frame = +3

Query: 132 DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 311
           + EPLEPSL+N+++Q SL+WIF           CS SLAVQLSKVRESVLIISTDPAHNI
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRESVLIISTDPAHNI 63

Query: 312 SDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGA 491
           SDAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEEYF+GE+EA+R+ KGVMQE++ A
Sbjct: 64  SDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEEYFDGENEALRVSKGVMQEMINA 123

Query: 492 FPGIDEAMSYAEVMKLVKGMNFS 560
            PGIDEAMSYAEVMKLVKGMNFS
Sbjct: 124 LPGIDEAMSYAEVMKLVKGMNFS 146



 Score =  127 bits (306), Expect = 2e-29
 Identities = 56/87 (64%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
 Frame = +1

Query: 565 VVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSDMFSNKM 744
           VVFDTAPTGHTLRL++FPQVVE+GLGKL+RLK KVAP ++Q  S+ G+AD N+D  S K+
Sbjct: 148 VVFDTAPTGHTLRLIAFPQVVEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNADTLSQKL 207

Query: 745 DEMLSVIRQVNAQFKDP-ESNYICVCL 822
           D+ML VI QVN QFK+P ++ ++CVC+
Sbjct: 208 DDMLRVITQVNEQFKNPDQTTFVCVCI 234



 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +2

Query: 788 KTPNQTTFVCVCIAEFLSLYETERLVQELTRCG 886
           K P+QTTFVCVCIAEF SLYETERLVQELT+CG
Sbjct: 222 KNPDQTTFVCVCIAEFFSLYETERLVQELTKCG 254


>AY070974-1|AAL48596.1|  336|Drosophila melanogaster RE07422p
           protein.
          Length = 336

 Score =  233 bits (571), Expect = 2e-61
 Identities = 110/143 (76%), Positives = 123/143 (86%)
 Frame = +3

Query: 132 DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 311
           + EPLEPSL+N+++Q SL+WIF           CS SLAVQLSKVRESVLIISTDPAHNI
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRESVLIISTDPAHNI 63

Query: 312 SDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGA 491
           SDAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEEYF+GE+EA+R+ KGVMQE++ A
Sbjct: 64  SDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEEYFDGENEALRVSKGVMQEMINA 123

Query: 492 FPGIDEAMSYAEVMKLVKGMNFS 560
            PGIDEAMSYAEVMKLVKGMNFS
Sbjct: 124 LPGIDEAMSYAEVMKLVKGMNFS 146



 Score =  127 bits (306), Expect = 2e-29
 Identities = 56/87 (64%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
 Frame = +1

Query: 565 VVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSDMFSNKM 744
           VVFDTAPTGHTLRL++FPQVVE+GLGKL+RLK KVAP ++Q  S+ G+AD N+D  S K+
Sbjct: 148 VVFDTAPTGHTLRLIAFPQVVEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNADTLSQKL 207

Query: 745 DEMLSVIRQVNAQFKDP-ESNYICVCL 822
           D+ML VI QVN QFK+P ++ ++CVC+
Sbjct: 208 DDMLRVITQVNEQFKNPDQTTFVCVCI 234



 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +2

Query: 788 KTPNQTTFVCVCIAEFLSLYETERLVQELTRCG 886
           K P+QTTFVCVCIAEF SLYETERLVQELT+CG
Sbjct: 222 KNPDQTTFVCVCIAEFFSLYETERLVQELTKCG 254


>AE013599-448|AAF59231.1|  336|Drosophila melanogaster CG1598-PA
           protein.
          Length = 336

 Score =  233 bits (571), Expect = 2e-61
 Identities = 110/143 (76%), Positives = 123/143 (86%)
 Frame = +3

Query: 132 DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 311
           + EPLEPSL+N+++Q SL+WIF           CS SLAVQLSKVRESVLIISTDPAHNI
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRESVLIISTDPAHNI 63

Query: 312 SDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGA 491
           SDAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEEYF+GE+EA+R+ KGVMQE++ A
Sbjct: 64  SDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEEYFDGENEALRVSKGVMQEMINA 123

Query: 492 FPGIDEAMSYAEVMKLVKGMNFS 560
            PGIDEAMSYAEVMKLVKGMNFS
Sbjct: 124 LPGIDEAMSYAEVMKLVKGMNFS 146



 Score =  127 bits (306), Expect = 2e-29
 Identities = 56/87 (64%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
 Frame = +1

Query: 565 VVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSDMFSNKM 744
           VVFDTAPTGHTLRL++FPQVVE+GLGKL+RLK KVAP ++Q  S+ G+AD N+D  S K+
Sbjct: 148 VVFDTAPTGHTLRLIAFPQVVEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNADTLSQKL 207

Query: 745 DEMLSVIRQVNAQFKDP-ESNYICVCL 822
           D+ML VI QVN QFK+P ++ ++CVC+
Sbjct: 208 DDMLRVITQVNEQFKNPDQTTFVCVCI 234



 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = +2

Query: 788 KTPNQTTFVCVCIAEFLSLYETERLVQELTRCG 886
           K P+QTTFVCVCIAEF SLYETERLVQELT+CG
Sbjct: 222 KNPDQTTFVCVCIAEFFSLYETERLVQELTKCG 254


>BT001458-1|AAN71213.1|  119|Drosophila melanogaster GM18141p
           protein.
          Length = 119

 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 47/68 (69%), Positives = 54/68 (79%)
 Frame = +3

Query: 132 DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 311
           + EPLEPSL+N+++Q SL+WIF           CS SLAVQLSKVRESVLIISTDPAHNI
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRESVLIISTDPAHNI 63

Query: 312 SDAFDQKF 335
           SDAFDQK+
Sbjct: 64  SDAFDQKY 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,414,996
Number of Sequences: 53049
Number of extensions: 656719
Number of successful extensions: 1791
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)