Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B24
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical p... 149 3e-36
U41029-2|AAL65785.1| 192|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 32 0.63
U64854-4|AAB18314.1| 308|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC024805-12|AAK39343.1| 557|Caenorhabditis elegans Hypothetical... 29 5.9
AC006611-3|AAM15554.1| 798|Caenorhabditis elegans Protein kinas... 29 5.9
AC006611-2|AAK85457.1| 867|Caenorhabditis elegans Protein kinas... 29 5.9
>Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical
protein ZK637.5 protein.
Length = 342
Score = 149 bits (360), Expect = 3e-36
Identities = 79/150 (52%), Positives = 98/150 (65%), Gaps = 10/150 (6%)
Frame = +3
Query: 138 EPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNISD 317
+ LE S+KN+++QK+L+WIF CSCSLA QLSKVRE VL+ISTDPAHNISD
Sbjct: 3 DQLEASIKNILEQKTLKWIFVGGKGGVGKTTCSCSLAAQLSKVRERVLLISTDPAHNISD 62
Query: 318 AFDQKFSKVPTKVKGFDNLFAMEID--PNVGLTELP--EEYF------EGESEAMRLDKG 467
AF QKF+K PT V+GF NLFAMEID PN E+ EE EG S + K
Sbjct: 63 AFSQKFTKTPTLVEGFKNLFAMEIDSNPNGEGVEMGNIEEMLQNAAQNEGGSGGFSMGKD 122
Query: 468 VMQEIVGAFPGIDEAMSYAEVMKLVKGMNF 557
+Q G PGIDEAMS+ E++KL+ ++F
Sbjct: 123 FLQSFAGGLPGIDEAMSFGEMIKLIDSLDF 152
Score = 87.4 bits (207), Expect = 1e-17
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = +1
Query: 565 VVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSDMFSNKM 744
VVFDTAPTGHTLRLL FP ++E+ K++ L+ P +NQ +FG+ + + KM
Sbjct: 155 VVFDTAPTGHTLRLLQFPTLLEKVFTKILSLQGMFGPMMNQFGGMFGMGGGSMNEMIEKM 214
Query: 745 DEMLSVIRQVNAQFKDPE-SNYICVCL 822
L ++++NAQFKDP + ++CVC+
Sbjct: 215 TTTLESVKKMNAQFKDPNCTTFVCVCI 241
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2
Query: 788 KTPNQTTFVCVCIAEFLSLYETERLVQELTRCG 886
K PN TTFVCVCIAEFLSLYETERL+QEL++ G
Sbjct: 229 KDPNCTTFVCVCIAEFLSLYETERLIQELSKQG 261
>U41029-2|AAL65785.1| 192|Caenorhabditis elegans Hypothetical
protein F47G3.2 protein.
Length = 192
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 565 VVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSDMFSNKM 744
VVFDTA TGHTLRLL FP +V+ K++ L+ + P +N I +F + D + M
Sbjct: 13 VVFDTASTGHTLRLLQFPTIVDNFFTKILSLQGMLEPMLNNIGGMFEMED--DETLETMM 70
Query: 745 DEMLSVIRQVNAQFKDPESN-YICVCL 822
+ + ++NAQFKD ++C+C+
Sbjct: 71 TAAVKDLERMNAQFKDLNCTLFVCICM 97
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 788 KTPNQTTFVCVCIAEFLSLYETERLVQELTRCG 886
K N T FVC+C+A+F + ER +QEL++ G
Sbjct: 85 KDLNCTLFVCICMADF----QAERHIQELSKQG 113
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 516 SYAEVMKLVKGMNFSCCSVRYCTDWTYSQTSIIPASCRTRSRQADAFEV 662
SY V+KL+K C +R T+ TY+ T + C +R + F V
Sbjct: 444 SYQGVLKLIKAKFTEPCYIRLFTETTYNSTFQVKNVCCGANRDINVFNV 492
>U64854-4|AAB18314.1| 308|Caenorhabditis elegans Hypothetical
protein K11C4.1 protein.
Length = 308
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 187 GGFSLEGKAELGKLRAVAVSQFS-CRKFAN 273
G F L G+AELG+LR + V F CRKF +
Sbjct: 144 GNFCL-GRAELGELRKIFVLDFGLCRKFVD 172
>AC024805-12|AAK39343.1| 557|Caenorhabditis elegans Hypothetical
protein Y51H7C.12 protein.
Length = 557
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 334 NFWSNASEILWAGSVDMINTDSR 266
+FWS + LW GS D + +SR
Sbjct: 349 DFWSMHQDTLWTGSFDQLELESR 371
>AC006611-3|AAM15554.1| 798|Caenorhabditis elegans Protein kinase
protein 32, isoformb protein.
Length = 798
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 524 SIAHSLINTRKSSNNLLHDTLVQSHSLRFSFK 429
S +HS + ++SN LH T + SLRF K
Sbjct: 630 STSHSSVENIRTSNGYLHHTPTSTRSLRFEDK 661
>AC006611-2|AAK85457.1| 867|Caenorhabditis elegans Protein kinase
protein 32, isoforma protein.
Length = 867
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 524 SIAHSLINTRKSSNNLLHDTLVQSHSLRFSFK 429
S +HS + ++SN LH T + SLRF K
Sbjct: 699 STSHSSVENIRTSNGYLHHTPTSTRSLRFEDK 730
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,884,596
Number of Sequences: 27780
Number of extensions: 351375
Number of successful extensions: 809
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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