Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B23
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.8  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 301 LVQICKMAQVYPHPAPEGCTSASSESAPSDQPIYP 405
           L  + ++  VYP+     C   + E++ SD P +P
Sbjct: 182 LETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFP 216


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 283 ALTNGKVLWPLLEER 239
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 283 ALTNGKVLWPLLEER 239
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 283 ALTNGKVLWPLLEER 239
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 283 ALTNGKVLWPLLEER 239
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 651 VLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESG 782
           VLF+  +   +GV Y ++ G+SR   + +    T LAL ++  G
Sbjct: 33  VLFVIIVAGNVGVLYTLLFGRSRKSRMNY--FITHLALADLSVG 74


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = -3

Query: 786 GHQTPHLLELSMCMSCGVQVHRGGTCP*QCSMVRPFYGITLAGKGPAQWD 637
           G  TP   E     S  V     G  P + ++   FYG T     PAQ D
Sbjct: 224 GADTPWQREYENVNSTVVNWVNAGADPGKLTIGLAFYGHTFQLADPAQHD 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,175
Number of Sequences: 336
Number of extensions: 3434
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)