Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B22
         (997 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007...    40   0.004
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...    39   0.005
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...    39   0.007
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...    38   0.009
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...    38   0.016
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...    36   0.038
02_01_0068 + 488943-490457                                             31   1.1  
04_04_0695 + 27318827-27320047                                         30   2.5  

>11_06_0360 -
           22699524-22699529,22699865-22699899,22700650-22700792,
           22701165-22701220,22701367-22701454,22702737-22703037,
           22704365-22704428
          Length = 230

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +1

Query: 382 DKEELVQRARLAEQAERYDDMAAAMKEVTEXXXXXXXXXXXXSFSVAL*KCRXVPGRSSW 561
           ++E++V+ A+LAEQAERYDDM   MK +               FSV   K      R+SW
Sbjct: 3   EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLL-FSVGF-KKTIGARRASW 60

Query: 562 RVI 570
           R++
Sbjct: 61  RIL 63


>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 23/70 (32%), Positives = 35/70 (50%)
 Frame = +1

Query: 364 SSTMSVDKEELVQRARLAEQAERYDDMAAAMKEVTEXXXXXXXXXXXXSFSVAL*KCRXV 543
           S+   + +EE V  A+LAEQAERY++M   M++V +            +      K    
Sbjct: 2   SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61

Query: 544 PGRSSWRVIS 573
             R+SWR+IS
Sbjct: 62  ARRASWRIIS 71


>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score = 38.7 bits (86), Expect = 0.007
 Identities = 23/70 (32%), Positives = 34/70 (48%)
 Frame = +1

Query: 364 SSTMSVDKEELVQRARLAEQAERYDDMAAAMKEVTEXXXXXXXXXXXXSFSVAL*KCRXV 543
           S    + +EE V  A+LAEQAERY++M   M++V +            +      K    
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279

Query: 544 PGRSSWRVIS 573
             R+SWR+IS
Sbjct: 280 ARRASWRIIS 289


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score = 38.3 bits (85), Expect = 0.009
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = +1

Query: 367 STMSVDKEELVQRARLAEQAERYDDMAAAMKEVTEXXXXXXXXXXXXSFSVAL*KCRXVP 546
           S     +EE V  A+LAEQAERY++M   M++V +            +      K     
Sbjct: 2   SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61

Query: 547 GRSSWRVIS 573
            R+SWR+IS
Sbjct: 62  RRASWRIIS 70


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score = 37.5 bits (83), Expect = 0.016
 Identities = 21/65 (32%), Positives = 33/65 (50%)
 Frame = +1

Query: 379 VDKEELVQRARLAEQAERYDDMAAAMKEVTEXXXXXXXXXXXXSFSVAL*KCRXVPGRSS 558
           + +EE V  A+LAEQAERY++M   M++V +            +      K      R+S
Sbjct: 1   MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60

Query: 559 WRVIS 573
           WR++S
Sbjct: 61  WRIVS 65


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score = 36.3 bits (80), Expect = 0.038
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
 Frame = +1

Query: 385 KEELVQRARLAEQAERYDDMAAAM-KEVTEXXXXXXXXXXXXSFSVAL*KCRXVPG--RS 555
           +EE+V  A+LAEQAERY++M   M K VT               ++     + V G  R+
Sbjct: 10  REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69

Query: 556 SWRVIS 573
           SWR++S
Sbjct: 70  SWRIVS 75


>02_01_0068 + 488943-490457
          Length = 504

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 444 GGRDEGSDGNRASNLATEERNLLFSCLIKMSXGAR 548
           G RD G DG+R   L    R  +F  L+ MS GAR
Sbjct: 164 GLRDRGGDGSRPVELRPLLRRAMFELLLYMSLGAR 198


>04_04_0695 + 27318827-27320047
          Length = 406

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 463 LPSSRP-PCRHIAQLVRPIWHVAPVLPCRRTSWTMGRELIH 344
           LPSS P P R +A+L +P+    PVL   R   T+  E +H
Sbjct: 37  LPSSSPVPARSLARLQKPLGLTVPVLRFLRRHPTLFAETLH 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,137,808
Number of Sequences: 37544
Number of extensions: 409239
Number of successful extensions: 945
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2916970260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)