Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B22
         (997 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   5.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   5.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   9.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   9.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 234 IRDLKXKTKRLNLPVNFLVFQFHPRSF 154
           I D   K    NL  + +V+Q +PRSF
Sbjct: 14  IVDAAWKPLPENLKEDLIVYQVYPRSF 40


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 234 IRDLKXKTKRLNLPVNFLVFQFHPRSF 154
           I D   K    NL  + +V+Q +PRSF
Sbjct: 14  IVDAAWKPLPENLKEDLIVYQVYPRSF 40


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 186 FLVFQFHPRSFLXKPRPPXKASSLXXWNSSXGRGG 82
           F V Q+H ++FL   R     SSL   +   G GG
Sbjct: 71  FDVDQWHNKTFLAVIRYDGVPSSLNVISEKIGNGG 105


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 189 NFLVFQFHPRSF 154
           N LV+Q +PRSF
Sbjct: 29  NALVYQIYPRSF 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,770
Number of Sequences: 438
Number of extensions: 3710
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33016347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)