Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B20
         (926 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    30   2.0  
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical...    29   3.6  
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical...    29   3.6  

>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
            protein Y53C10A.10 protein.
          Length = 1582

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/83 (26%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
 Frame = -3

Query: 834  GPFGXKXFXRGXXPGXXGXXXXXPXWXGXXTXPPXXXXXGPXE--SXXXEXXXGPXYPNX 661
            GP        G  P         P W      P      GP +          GP  PN 
Sbjct: 1011 GPSPNGPSPNGPSPNGPSPNGPTPNWPSP-NGPSPNGPNGPSDPNKPGPNGPNGPSDPNK 1069

Query: 660  PXPXGWAESXXQXKXSPNXPPXP 592
            P P G  E     K  PN P  P
Sbjct: 1070 PGPNGPNEPSDPNKPGPNGPNGP 1092



 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = -3

Query: 681  GPXYPNXPXPXGWAESXXQXKXSPNXPPXP 592
            GP  PN P P G  ES    K  PN P  P
Sbjct: 1161 GPSDPNKPGPNGPNESSDPNKPGPNGPNEP 1190



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -3

Query: 681  GPXYPNXPXPXGWAESXXQXKXSPNXPPXP 592
            GP  PN P P G  E     K  PN P  P
Sbjct: 1091 GPSDPNKPGPNGPNEPSDPNKPGPNGPNGP 1120



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -3

Query: 681  GPXYPNXPXPXGWAESXXQXKXSPNXPPXP 592
            GP  PN P P G  E     K  PN P  P
Sbjct: 1119 GPSDPNKPGPNGPNEPSDPNKPGPNGPNGP 1148



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -3

Query: 681  GPXYPNXPXPXGWAESXXQXKXSPNXPPXP 592
            GP  PN P P G  E     K  PN P  P
Sbjct: 1301 GPSDPNKPGPNGPNEPSDPNKPGPNGPNGP 1330


>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26b protein.
          Length = 1133

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +3

Query: 117 IIPRPKALEEVNHNRVAIPLVV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLA 296
           II     ++ +   RVA+P++   +      +  S  +D   +  G KF      N  LA
Sbjct: 116 IIKNKDHIDMIVKRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNPKLA 175

Query: 297 DQPRGQRTG 323
           ++  G + G
Sbjct: 176 EKDPGLKEG 184


>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26a protein.
          Length = 1172

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +3

Query: 117 IIPRPKALEEVNHNRVAIPLVV*RKAAGTIAVPTSSSRDKLSVTTGTKFVTLNKENRNLA 296
           II     ++ +   RVA+P++   +      +  S  +D   +  G KF      N  LA
Sbjct: 116 IIKNKDHIDMIVKRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNPKLA 175

Query: 297 DQPRGQRTG 323
           ++  G + G
Sbjct: 176 EKDPGLKEG 184


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,399,609
Number of Sequences: 27780
Number of extensions: 280996
Number of successful extensions: 565
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)