Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B19
(877 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 110 5e-23
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 89 1e-16
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 82 2e-14
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 73 7e-12
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 43 0.009
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 40 0.083
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 40 0.083
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 37 0.58
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_UPI0000E821BC Cluster: PREDICTED: similar to CGI-105 pr... 33 9.5
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.5
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 110 bits (264), Expect = 5e-23
Identities = 65/109 (59%), Positives = 70/109 (64%)
Frame = +3
Query: 315 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 494
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 495 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 641
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APS
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPS 122
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 89.4 bits (212), Expect = 1e-16
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = +3
Query: 483 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 641
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 54
Score = 74.1 bits (174), Expect = 4e-12
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1
Query: 625 PWKLPRCALLFRPCRLRDTCPPFSLREAWRFLIAHA 732
P + P CALLFRPCRL DTCPPFSLREAWRFLIAHA
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHA 84
Score = 33.5 bits (73), Expect = 7.2
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 677 IPVRLSPFGKRGAFS*LTLXVSQFG--CRSFAPSWAVCXXP 793
+P PF R A+ L CRSFAPSWAVC P
Sbjct: 64 LPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 82.2 bits (194), Expect = 2e-14
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3
Query: 501 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 641
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APS
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPS 90
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 73.3 bits (172), Expect = 7e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 645 RSPVPTLPLTGYLSAFLPSGSVALSHSSRCXYLSS 749
RSPVPTLPLTGYLSAFLPSGSVALSHSSRC YLSS
Sbjct: 2 RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSS 36
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 491 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 378
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 64.1 bits (149), Expect = 4e-09
Identities = 36/86 (41%), Positives = 43/86 (50%)
Frame = -2
Query: 849 PGWTQXDSYRIRXXGRAERGXXHTAQLGANDLHPN*DTYSVSYEKAPRFPKGERRTGIP* 670
PGWTQ DSYR RAERG + + P+ DT SVSYEKAPRFPKG++ +
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSG 67
Query: 669 AAGSEQESAXRELPGGNAWYLYSPVG 592
A G + SPVG
Sbjct: 68 KRQGRNRRAHEGAAGEKSPASLSPVG 93
Score = 44.8 bits (101), Expect = 0.003
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = -1
Query: 793 GXXAHSPAWSERPTPELRYXQREL*ESATLPEGRKADRYPVSG-RVGTGER-XEGASRGK 620
G A+SPAWSERP P ++ P+G+KA++ VSG R G R EGA+ K
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ--VSGKRQGRNRRAHEGAAGEK 84
Query: 619 RLVSL*SCRVSPPLT 575
SL PPLT
Sbjct: 85 SPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 291 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 458
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 390 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 563
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 564 IDAQVRGGETRQDYKDTRRFPLEAPS 641
I Q + +T+ +YK T FPL++PS
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPS 107
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 93 DPDMIRYIDEFGQTTTRMQ 149
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 410 HSKAVIRLSTESGDNAGKNM 469
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 217 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 339
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 43.2 bits (97), Expect = 0.009
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 852 LPGWTQXDSYRIRXXGRAERG 790
LPGWTQ DSYRIR GRAERG
Sbjct: 7 LPGWTQDDSYRIRRSGRAERG 27
Score = 34.3 bits (75), Expect = 4.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -1
Query: 793 GXXAHSPAWSERPTP 749
G AHSPAWSERPTP
Sbjct: 27 GVRAHSPAWSERPTP 41
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 39.9 bits (89), Expect = 0.083
Identities = 26/52 (50%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 644 ALSCSDPAAYGIPVRLSPFGKRG--AFS*LTLXVSQFGCRSFAPSWAVCXXP 793
ALSCS+PA IPV PF G A S + CRSFAPSWAV P
Sbjct: 45 ALSCSNPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNP 94
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 39.9 bits (89), Expect = 0.083
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +3
Query: 792 PVQPDRCXLSGNYRLESXXV 851
PVQPDRC LSGNYRLES V
Sbjct: 5 PVQPDRCALSGNYRLESNPV 24
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 361 ERGSGRAPNTQTASPRALADSLMQ 290
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 37.1 bits (82), Expect = 0.58
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2
Query: 849 PGWTQXDSYRIRXXGRAERG 790
PGWTQ +SYRIR RAERG
Sbjct: 8 PGWTQVNSYRIRRSSRAERG 27
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 500 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 378
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 251 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 87
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_UPI0000E821BC Cluster: PREDICTED: similar to CGI-105
protein; n=2; Gallus gallus|Rep: PREDICTED: similar to
CGI-105 protein - Gallus gallus
Length = 406
Score = 33.1 bits (72), Expect = 9.5
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 612 TRRFPLEAPSXRSPVPTLPLTGYLSAFLPSGSVALSHSSRCXYLSSGVGRSLQAGLCAXX 791
T RFPL P PVP P + G A++ S R L+SG R +AG+
Sbjct: 135 TARFPLRIPRAEFPVPAAPPAPRCHWSVRRGGRAVAPSRRA--LASGRHRLPRAGVRLLA 192
Query: 792 PV-QPDRCXLSG-NYR 833
P+ P++ G NYR
Sbjct: 193 PIDDPEKVICVGLNYR 208
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 206 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 45
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,258,149
Number of Sequences: 1657284
Number of extensions: 15366769
Number of successful extensions: 39662
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 38129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39649
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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