Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B19
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0175 + 32152428-32153423,32153692-32153889,32154942-321551...    29   3.7  
06_01_0964 - 7417158-7417517,7417596-7417868,7418400-7418810,741...    29   4.9  
04_04_0030 + 22279716-22280052,22280644-22281144,22281369-222816...    29   4.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  

>03_06_0175 +
           32152428-32153423,32153692-32153889,32154942-32155121,
           32156224-32156481,32157310-32157381
          Length = 567

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = +3

Query: 612 TRRFPLEAPSXRSPVPTLPLTGYLSAFLPSGSVALSHSSRCXYLSSGVGRSLQA 773
           +RR PL  P   SP+ T+      +A    G+ A+ H +   +L + + R+ ++
Sbjct: 51  SRRIPLSIPCVASPMDTVSEAAMAAAMASLGAAAVVHCNTEPHLQASIVRAAKS 104


>06_01_0964 -
           7417158-7417517,7417596-7417868,7418400-7418810,
           7419270-7419347
          Length = 373

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 678 YLSAFLPSGSVALSHSSRCXYLSSGVGRSLQAG 776
           Y S   P  SV L HSS C +  S V   L+AG
Sbjct: 139 YYSRLFPRQSVHLFHSSYCLHWRSQVPEGLEAG 171


>04_04_0030 +
           22279716-22280052,22280644-22281144,22281369-22281692,
           22281860-22281945,22282105-22282517,22282612-22282878,
           22282977-22283730
          Length = 893

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +2

Query: 590 NPTGL*RYQAFPPGSSLXALSCSDPAAYGIP 682
           NP  + R QAFPP S L      DPA YG P
Sbjct: 408 NPVNIERLQAFPPVSKL------DPAVYGPP 432


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 348 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 503
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 297 NESAN---ARGEAVCVLGALPLPRSLTRCAR 380
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,864,736
Number of Sequences: 37544
Number of extensions: 460685
Number of successful extensions: 1303
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)