Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B18
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041028-1|AAH41028.1|  347|Homo sapiens FLJ10769 protein protein.     56   1e-07
AL139385-4|CAI17008.1|  390|Homo sapiens novel protein containin...    56   1e-07
AK001631-1|BAA91797.1|  390|Homo sapiens protein ( Homo sapiens ...    56   1e-07

>BC041028-1|AAH41028.1|  347|Homo sapiens FLJ10769 protein protein.
          Length = 347

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +2

Query: 344 KLTSNIVPTLNG-KSKGDLGRIGIIGGSVEYTGAPYFSAIAAFK 472
           +L  NI+P L+  K KG  GRIG++GG  EYTGAPYF+AI+A K
Sbjct: 55  QLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGAPYFAAISALK 98



 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 471 RAGADIVYVITTEDAAPVIKIYSPDLIVYPFLNKKYA-SKISSLLPKMDAIXIG 629
           + GAD+ +V     AAPVIK YSP+LIV+P L+   A  ++   LP++ A+ +G
Sbjct: 98  KVGADLSHVFCASAAAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVG 151


>AL139385-4|CAI17008.1|  390|Homo sapiens novel protein containing a
           carbohydrate kinase domain protein.
          Length = 390

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +2

Query: 344 KLTSNIVPTLNG-KSKGDLGRIGIIGGSVEYTGAPYFSAIAAFK 472
           +L  NI+P L+  K KG  GRIG++GG  EYTGAPYF+AI+A K
Sbjct: 55  QLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGAPYFAAISALK 98



 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 471 RAGADIVYVITTEDAAPVIKIYSPDLIVYPFLNKKYA-SKISSLLPKMDAIXIG 629
           + GAD+ +V     AAPVIK YSP+LIV+P L+   A  ++   LP++ A+ +G
Sbjct: 98  KVGADLSHVFCASAAAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVG 151


>AK001631-1|BAA91797.1|  390|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10769 fis, clone NT2RP4000151. ).
          Length = 390

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +2

Query: 344 KLTSNIVPTLNG-KSKGDLGRIGIIGGSVEYTGAPYFSAIAAFK 472
           +L  NI+P L+  K KG  GRIG++GG  EYTGAPYF+AI+A K
Sbjct: 55  QLVRNIIPPLSSTKHKGQDGRIGVVGGCQEYTGAPYFAAISALK 98



 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +3

Query: 471 RAGADIVYVITTEDAAPVIKIYSPDLIVYPFLNKKYA-SKISSLLPKMDAIXIG 629
           + GAD+ +V     AAPVIK YSP+LIV+P L+   A  ++   LP++ A+ +G
Sbjct: 98  KVGADLSHVFCASAAAPVIKAYSPELIVHPVLDSPNAVHEVEKWLPRLHALVVG 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,913,945
Number of Sequences: 237096
Number of extensions: 1193571
Number of successful extensions: 5644
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5644
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)