Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP24_F_B15
(886 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069076-1|AAL39221.1| 997|Drosophila melanogaster GH09323p pro... 30 4.9
AF461101-1|AAL66369.1| 997|Drosophila melanogaster dystroglycan... 30 4.9
AF461100-1|AAL66368.1| 1179|Drosophila melanogaster dystroglycan... 30 4.9
AF461099-1|AAL66367.1| 914|Drosophila melanogaster dystroglycan... 30 4.9
AF277390-1|AAG17399.2| 649|Drosophila melanogaster dystroglycan... 30 4.9
AE013599-2171|AAO41377.2| 1179|Drosophila melanogaster CG18250-P... 30 4.9
AE013599-2170|AAF58068.2| 997|Drosophila melanogaster CG18250-P... 30 4.9
AE013599-2169|AAM70943.3| 914|Drosophila melanogaster CG18250-P... 30 4.9
AE014297-4641|AAN14249.1| 659|Drosophila melanogaster CG31019-P... 29 6.5
AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA... 29 6.5
U31961-5|AAA84404.1| 424|Drosophila melanogaster protein ( Dros... 29 8.5
AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-P... 29 8.5
>AY069076-1|AAL39221.1| 997|Drosophila melanogaster GH09323p
protein.
Length = 997
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 189 SITNFTNKAFFSLHSSCGLSKLINVSYHVWIQLTLS*REIRGRGTN-NLNLKEFPIV 22
+I NF N + H+SC K + ++ V++ LS RE R LNL F +V
Sbjct: 775 TIVNFYNTTLYRKHNSC-REKEVAMTRSVYLNSDLSLREAAKRALGPELNLTNFSVV 830
>AF461101-1|AAL66369.1| 997|Drosophila melanogaster dystroglycan
type II protein.
Length = 997
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 189 SITNFTNKAFFSLHSSCGLSKLINVSYHVWIQLTLS*REIRGRGTN-NLNLKEFPIV 22
+I NF N + H+SC K + ++ V++ LS RE R LNL F +V
Sbjct: 775 TIVNFYNTTLYRKHNSC-REKEVAMTRSVYLNSDLSLREAAKRALGPELNLTNFSVV 830
>AF461100-1|AAL66368.1| 1179|Drosophila melanogaster dystroglycan type
I protein.
Length = 1179
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 189 SITNFTNKAFFSLHSSCGLSKLINVSYHVWIQLTLS*REIRGRGTN-NLNLKEFPIV 22
+I NF N + H+SC K + ++ V++ LS RE R LNL F +V
Sbjct: 957 TIVNFYNTTLYRKHNSC-REKEVAMTRSVYLNSDLSLREAAKRALGPELNLTNFSVV 1012
>AF461099-1|AAL66367.1| 914|Drosophila melanogaster dystroglycan
type III protein.
Length = 914
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 189 SITNFTNKAFFSLHSSCGLSKLINVSYHVWIQLTLS*REIRGRGTN-NLNLKEFPIV 22
+I NF N + H+SC K + ++ V++ LS RE R LNL F +V
Sbjct: 692 TIVNFYNTTLYRKHNSC-REKEVAMTRSVYLNSDLSLREAAKRALGPELNLTNFSVV 747
>AF277390-1|AAG17399.2| 649|Drosophila melanogaster
dystroglycan-like protein DG protein.
Length = 649
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 189 SITNFTNKAFFSLHSSCGLSKLINVSYHVWIQLTLS*REIRGRGTN-NLNLKEFPIV 22
+I NF N + H+SC K + ++ V++ LS RE R LNL F +V
Sbjct: 427 TIVNFYNTTLYRKHNSC-REKEVAMTRSVYLNSDLSLREAAKRALGPELNLTNFSVV 482
>AE013599-2171|AAO41377.2| 1179|Drosophila melanogaster CG18250-PC,
isoform C protein.
Length = 1179
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 189 SITNFTNKAFFSLHSSCGLSKLINVSYHVWIQLTLS*REIRGRGTN-NLNLKEFPIV 22
+I NF N + H+SC K + ++ V++ LS RE R LNL F +V
Sbjct: 957 TIVNFYNTTLYRKHNSC-REKEVAMTRSVYLNSDLSLREAAKRALGPELNLTNFSVV 1012
>AE013599-2170|AAF58068.2| 997|Drosophila melanogaster CG18250-PA,
isoform A protein.
Length = 997
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 189 SITNFTNKAFFSLHSSCGLSKLINVSYHVWIQLTLS*REIRGRGTN-NLNLKEFPIV 22
+I NF N + H+SC K + ++ V++ LS RE R LNL F +V
Sbjct: 775 TIVNFYNTTLYRKHNSC-REKEVAMTRSVYLNSDLSLREAAKRALGPELNLTNFSVV 830
>AE013599-2169|AAM70943.3| 914|Drosophila melanogaster CG18250-PB,
isoform B protein.
Length = 914
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 189 SITNFTNKAFFSLHSSCGLSKLINVSYHVWIQLTLS*REIRGRGTN-NLNLKEFPIV 22
+I NF N + H+SC K + ++ V++ LS RE R LNL F +V
Sbjct: 692 TIVNFYNTTLYRKHNSC-REKEVAMTRSVYLNSDLSLREAAKRALGPELNLTNFSVV 747
>AE014297-4641|AAN14249.1| 659|Drosophila melanogaster CG31019-PA
protein.
Length = 659
Score = 29.5 bits (63), Expect = 6.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 685 QVSGKRQGRNRRAHEGASRGK 623
+V KR+GRNR AH SR K
Sbjct: 491 EVRSKRRGRNRHAHHSRSRSK 511
>AE014296-778|AAX52730.2| 660|Drosophila melanogaster CG33545-PA
protein.
Length = 660
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 626 PPGSSLVRSPVPTLPLTGYLSAFLPSGSVALSHXSRCRYLSSV 754
P GSS + SPVP PL SA +P+ +V L+ C SV
Sbjct: 263 PSGSSFMPSPVPPAPLPA--SASVPAPTVPLATQISCPSAPSV 303
>U31961-5|AAA84404.1| 424|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 424
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 303 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 398
ES +VC G LP+P L C + GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371
>AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-PA
protein.
Length = 417
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 303 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 398
ES +VC G LP+P L C + GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,108,998
Number of Sequences: 53049
Number of extensions: 806355
Number of successful extensions: 2107
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2107
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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