Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B14
         (807 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.6  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   6.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.7  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 161  SLCNFVNFGFA 129
            SLC  +N+GFA
Sbjct: 2348 SLCTHINYGFA 2358


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -2

Query: 161 SLCNFVNFGFAGIFRN 114
           ++C  +N+ F G++ N
Sbjct: 51  NICTHINYAFLGVYPN 66


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 170 SLASLCNFVNFGFAGIFRNAQNSRIICY 87
           S A + +F+   F+G   +A   +++CY
Sbjct: 2   SKALVASFLLVYFSGALVSATTDKVVCY 29


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 164 ASLCNFVNFGFAGI 123
           A+LC  VN+ F G+
Sbjct: 47  ANLCTHVNYAFLGL 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,416
Number of Sequences: 336
Number of extensions: 1220
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)