Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP24_F_B14
         (807 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084194-1|AAL89932.1|  370|Drosophila melanogaster RH07106p pro...    31   1.9  
AE014297-1786|AAF55010.1|  370|Drosophila melanogaster CG3061-PA...    31   1.9  

>AY084194-1|AAL89932.1|  370|Drosophila melanogaster RH07106p
           protein.
          Length = 370

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +3

Query: 93  NYTRILGVSKNASESEINE-ITQTC*RVHPGQNPAAG 200
           +Y  +LGVSK A++SEI +   +   ++HP +N A G
Sbjct: 106 DYYEVLGVSKTATDSEIKKAYKKLALQLHPDKNKAPG 142


>AE014297-1786|AAF55010.1|  370|Drosophila melanogaster CG3061-PA
           protein.
          Length = 370

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +3

Query: 93  NYTRILGVSKNASESEINE-ITQTC*RVHPGQNPAAG 200
           +Y  +LGVSK A++SEI +   +   ++HP +N A G
Sbjct: 106 DYYEVLGVSKTATDSEIKKAYKKLALQLHPDKNKAPG 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,392,581
Number of Sequences: 53049
Number of extensions: 254100
Number of successful extensions: 352
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)